Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0309 ATGGAACATAGTAGTAGTTTGGTTTTCTGGCTACTGGGGTTGCTTCTTTTGTTGTTGATGGAGATTTCTTCTGCTGCTCTTTCTCCTTCTGGCATAAACTATGAAGTTGTAGCTCTGATGGCCATAAAGAATGACTTGATTGATCCTCACAATGTTCTGGAAAATTGGGATATTAATTCTGTTGATCCATGTAGCTGGAGAATGATTACCTGTTCCCCTGATGGCTCTGTTTCTGCATTGGGATTGCCCAGTCAGAACTTGTCTGGTACACTATCTCCTGGGATTGGAAACCTTACTAACTTACAATCTGTGTTGCTTCAGAATAATGCTATTTCTGGTAGGATTCCTGCTGCAATAGGAAGCTTGGAAAAGCTTCAGACACTTGATCTTTCCAATAATACATTTAGTGGTGAGATACCCAGTTCTTTGGGAGGCCTCAAGAACCTGAATTATTTGAGGTTAAATAATAACAGCCTTACAGGATCCTGCCCTCAGTCTCTTAGCAACATTGAAGGTCTAACCCTTGTGGACCTCTCCTACAACAATCTGAGTGGTTCCCTGCCAAGAATATCAGCAAGAACTTTAAAGATTGTGGGTAACTCTTTAATTTGTGGCCCAAAAGCAAACAACTGTTCTACTATTTTACCAGAGCCACTTTCCTTCCCTCCAGATGCACTGAGAGGCCAATCAGACTCTGGTAAAAAAAGCCATCATGTGGCACTTGCTTTTGGTGCAAGTTTTGGTGCTGCTTTTGTCCTTGTGATTATAGTTGGGTTTCTTGTTTGGTGGCGATATAGACGCAACCAGCAGATATTCTTTGATGTCAATGAACATTATGATCCAGAGGTGCGTCTTGGTCATTTAAAAAGGTTTTCATTCAAAGAGCTTCGAGCTGCAACTGACCATTTCAACTCAAAGAACATTCTAGGAAGAGGTGGCTTTGGAATAGTTTTCAAGGCATGCTTGAATGATGGGTCTGTTGTGGCTGTCAAAAGGTTAAAGGACTATAATGCAGCCGGTGGTGAGATCCAATTTCAGACAGAAGTTGAGACCATAAGTTTGGCTGTCCACCGGAATCTTCTGCGGCTTTCGGGGTTTTGCAGTACTCAGCATGAAAGGCTCCTTGTTTATCCCTACATGTCTAATGGCAGTGTAGCCTCTAGATTAAAAGATCACATTCACGGTCGGCCAGCTTTAGATTGGACGAGGCGAAAGAGAATAGCTTTAGGTACAGCAAGAGGGTTGGTTTACTTGCATGAGCAATGTGACCCTAAAATTATTCACCGCGATGTCAAAGCAGCAAACATTTTGCTAGATGAAGACTTTGAAGCTGTTGTTGGTGATTTTGGTTTAGCTAAGCTTCTGGATCATAGAGATTCGCATGTGACCACTGCTGTGCGTGGCACTGTCGGTCACATTGCTCCAGAGTATCTATCCACTGGCCAATCATCAGAAAAAACTGATGTGTTTGGGTTTGGAATCTTGCTGCTTGAACTGATCACAGGTCATAAGGCTCTAGATTTTGGGCGAGCGGCAAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCACCAGGATGGAAGATTGAGTCAAATGGTAGACAAAGATCTAAAGGGCAACTTCGATCTGATTGAACTAGAAGAAATGGTTCAGGTTGCACTCTTGTGTACACAATTCAATCCTTCGCACCGCCCCAAGATGTCAGAAGTATTGAAGATGTTAGAAGGGGATGGCTTAGCTGAGAGATGGGAGGCCTCACAGAGGATTGAAACACCAAGGTTTCGGTCTTGTGAGCCTCAAAGATATTCAGATTTAATAGAGGAATCTTCACTCGTAGTTGAAGCCATGGAGCTTTCTGGTCCTAGGTGA 1875 0.4304 MEHSSSLVFWLLGLLLLLLMEISSAALSPSGINYEVVALMAIKNDLIDPHNVLENWDINSVDPCSWRMITCSPDGSVSALGLPSQNLSGTLSPGIGNLTNLQSVLLQNNAISGRIPAAIGSLEKLQTLDLSNNTFSGEIPSSLGGLKNLNYLRLNNNSLTGSCPQSLSNIEGLTLVDLSYNNLSGSLPRISARTLKIVGNSLICGPKANNCSTILPEPLSFPPDALRGQSDSGKKSHHVALAFGASFGAAFVLVIIVGFLVWWRYRRNQQIFFDVNEHYDPEVRLGHLKRFSFKELRAATDHFNSKNILGRGGFGIVFKACLNDGSVVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLSGFCSTQHERLLVYPYMSNGSVASRLKDHIHGRPALDWTRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQDGRLSQMVDKDLKGNFDLIELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAERWEASQRIETPRFRSCEPQRYSDLIEESSLVVEAMELSGPR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0309 624 Gene3D Ribonuclease Inhibitor 32 213 IPR032675 -
Gso2g0309 624 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Gso2g0309 624 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Gso2g0309 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 624 - -
Gso2g0309 624 ProSiteProfiles Protein kinase domain profile. 303 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0309 624 SUPERFAMILY Protein kinase-like (PK-like) 279 577 IPR011009 -
Gso2g0309 624 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Gso2g0309 624 Pfam Protein kinase domain 304 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0309 624 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 624 - -
Gso2g0309 624 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Gso2g0309 624 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0309 624 Gene3D Transferase(Phosphotransferase) domain 1 380 595 - -
Gso2g0309 624 SUPERFAMILY L domain-like 33 203 - -
Gso2g0309 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0309 Gso-Chr2 3305130 3310840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0309 68 624 Receptor kinase-like Gene Family AT1G60800 77.018 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso2g0309 Pkinase 6.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0309 - - gmx:100784164 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0309 2 3305130 3310840 Gso2g0309 2 3305130 3310840 ECH