Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0283 ATGGCTTCTTCATTGAGGATCTCAAGGCTCCTCTCTCGTTCTTTTCTTTCTGCTTCCACTACTACTCCTTTGTTTTCTAGAGGCGGAAGTGGTGCTCTTGGTGCAGGGCTCAGTAAATTCAGCACTGCTGCTGCCATTGAAGAACCAATTAAACCACCAATTAAAGTAGAACACACCCAGCTCTTAATTGATGGAAAATTTGTTGATGCTGCTACTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGATGTGATTTCTCATGTTGCTGAGGGTGACCATGAAGATGTTGATCGAGCAGTTGCAGCTGCTCGCAAAGCCTTCGACCGCGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTTGAAAAGCACAATGATGACCTTGCTGCACTCGAGACTTGGGATAATGGGAAGCCATATGAACAGTCTGCTCAAATCGAAATTCCAATGCTGGTTCGCCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCATATCATGTGCAAACATTGCATGAACCCATTGGTGTTGCCGGTCAGATCATTCCGTGGAACTTCCCTCTTGTCATGTTTGCCTGGAAGGTTGGGCCAGCATTGGCCTGTGGTAACACCATTGTTCTCAAAACAGCTGAGCAGACTCCATTATCTGCTTTGTATGCATCAAAGTTGCTTCATGAGGCTGGACTGCCTCCTGGTGTTCTGAATATAATATCTGGCTTTGGTCCAACTGCCGGTGCTGCTATTGCTAGTCACATGGACATAGATAAGCTTGCTTTCACTGGTTCAACCGAAACTGGAAAAATTGTCCTTGAACTGGCGGCTAGAAGTAACCTTAAGCCTGTAACTTTGGAGCTTGGTGGGAAATCCCCATTCATTGTATGCGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCCGGGTCTAGAACATTTGTACACGAACGTGTGTACGATGAATTTATTGAGAAAGCAAAGGCACGCGCTTTGAAGCGTGCTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATACTGAAGTATATTAGATCCGGTGTTGAAAGTGGAGCTACTCTTGAAACCGGAGGAGATAGATTTGGCAACTCGGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTAAGGATGACATGCTGATTGCGAAGGAAGAGATCTTTGGCCCAGTGCAAAGCATATTAAAATTCAAGGACCTTGATGATGTGATTCAAAGAGCAAATAACACACACTATGGCCTTGCAGCAGGGGTGTTCACAAAAAACATTAACACAGCTAATACTTTGACTAGAGCATTGAGAGCTGGAACAGTGTGGGTGAACTGCTTTGATACATTTGATGCAGCAATTCCCTTTGGAGGGTACAAAATGAGTGGTCAAGGAAGAGAAAAAGGAGAATACAGTCTCAAGAATTACTTGCAAGTGAAGGCTGTTGTTACATCCTTGAAGAACCCAGCTTGGCTTTGA 1620 0.4475 MASSLRISRLLSRSFLSASTTTPLFSRGGSGALGAGLSKFSTAAAIEEPIKPPIKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDRGPWPKMTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDDVIQRANNTHYGLAAGVFTKNINTANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNPAWL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0283 539 SUPERFAMILY ALDH-like 55 533 IPR016161 GO:0016491
Gso2g0283 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Gso2g0283 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 527 IPR016162 GO:0016491
Gso2g0283 539 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Gso2g0283 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 309 498 IPR016163 GO:0016620
Gso2g0283 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Gso2g0283 539 CDD ALDH_F2BC 56 531 - -
Gso2g0283 539 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 27 539 - -
Gso2g0283 539 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 27 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0283 Gso-Chr2 3078915 3083306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0283 6 539 Aldehyde Dehydrogenase Gene Family AT3G48000 77.196 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0283 K00128 - gmx:100782019 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0283 2 3078915 3083306 Gso2g0283 2 3078915 3083306 ECH
Gso1g0280 1 3296495 3300774 Gso2g0283 2 3078915 3083306 GST
Gso2g0283 2 3078915 3083306 Gso18g1107 18 20118984 20122742 PCT
Gso18g1107 18 20118984 20122742 Gso2g0283 2 3078915 3083306 PCT