LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso2g0274	ATGGGTGGCATAGGTAAGACTACCCTGGCAATTGCTTTACATGCCAAACTATTCTCTCAATTTGAAGGCCACTGCTTTCTGGGAAATGTAAGGGTACAAGCAGAGAAGCATGGTCTCAATGCCTTACGCAGAACACTTTTCTCTGAGTTGTTCCCAGGAGAAAATCTTCATGTACATGTGCCCAAAGTTGAATCCCATTTTATAACGAGAAGACTTAAACGCAAAAAAGTTTTTCTTATTTTGGATGACGTGGCTTCCTCGGAACAGTTAGAAGATCTAATCGGTGATTTCAATTGTTTCGGACCAGAAAGTAGGGTGATTGTAACAACTAGAGATAAACACATATTTAGCCATGTTGATGAGATATATGAGGTAAAGGAATTGAACCACCATGACTCTCTTCAACTTTTCTGTTTGAATGCTTTCAGAGAAAAGCATCCCAAGAATGGATTTGAAGAGCTATCAGAAAGTGTACTTGCCTATTGCAAAGGCAATCCTTTGGCGTTAAAAATTTTGGGTGCATGTCTTCGTTCAAGAAGTGAACAAGCATGGAACAGTGAATTGAGAAAGCTTCAAAAGATTCCAAATGTGAAAATTCACAATGTTTTAAAATTGAGTTTTGATGATTTAGATCATACTGAGCAGGACATATTTCTAGACATTGCATGCTTTCTCAAAGGAGAATATAAAGATCACGTAATAAGTCTACTGGAAGCATGTAATTTGTTTCCAGCCATTGGAATAGAAGTCCTTGAAGACAAGTGTCTTATAACTATTTCACCTACACGTACAATAGAAATGCATGATCTGATACAAGAAATGGGTTGGAATATTGTTCAACAAGAATCTATCGAAGATCCTGGTAGGCGAAGTCGATTGTGGGATCCTGAAGAGGTGTATGATGTGCTGAAATATAACAGGGGAACTGAAGCAGTAGAAGGCATAATTTTGGATCTGTCTAAAATTGAGGATCTACATTTGAGCTTTAATTCCTTTAGAAAGATGTCTAACATAAGATTTCTTAAATTCTACTTTGGAGGGGAGTGGAGTGGCAGATGTAAAATATACCTTCCTATGAATGGTCTTGAGACATTGTCTGACAAATTAAGGTACCTTCAATGGCATGGATATTGTTTGGAGTCTTTGCCATCAACCTTTTCTGCTAAATTTCTTGTTGAGCTTGCCATGCCCTACAGCAACCTTCAAAAGCTTTGGGATGGAGTTCAGAATCTTGTGAATTTAAAGGACATTAACCTCGGATTCTGCGAAAACCTGGTTGAGGTTCCAGACTTATCTATGGCGACAAATCTCAAAGTGTTAGCTCTTCCTCAGTGTAAAAGTCTGCGTCAAGTTCATCCATCCATATTGTCTCTCCCTGAGCTTCAGGTTCTGGATTTAGAAGGCTGCACTGAGATTGAAAGCCTTCAAACAGACGTTCACTTAAAATCTCTCCAAAACCTCCGTCTTAGCAACTGCTCATCCCTCAAGGATTTTTCAGTATCTTCAGTTGAACTTGAGAGGTTGTGGTTAGATGGCACACATATCCAAGAATTGCCCTCATCAATTTGGAATTGTGCAAAACTCGGTCTTATCAGCGTACGAGGTTGTAACAATCTCGACAGTTTTGGGGACAAGTTATCTCATGATTCGAGAATGGCATCTTTAAATAATCTGATACTTTCTGGATGCAAACAACTCAATGCATCGAATCTGCATTTTATGATTGATGGTTTGCGGTCTTTAACATTTCTGGAGTTGGAAAATTCTTGCAACTTAAGAACACTCCCTGAGAGCATTGGCTCGTTATCATCATTGCAGCATTTAAAACTAAGCGGAAGCAATGTTGAGAGCTTGCCTGCAAGCATCAAGAACCTTCTGATGCTGAGAAGCCTTTATTTAGATAACTGCATGAAACTTGTGTCTCTGCCTGAACTTCCACTGTCTCCGTGGTCTTTAAGTGCAGCTAACTGTACATCTTTGCTGACAAACTTCACTCAACTGAACATACCCTTTCAACTTGAACAAGGACTAGAACAACTCCCTGAATCTCTTTTCATTCCTGGAGACCATGTTCCTGACAGGTTCAGCTTTCATGCTCAAGGGGCTTCAGTGACTATTCCGCATCTTCCACATGTTGGCTTATGTGGCTTTATTTGTTGCCTCGTTCTTTCTCGGTCACACCCTAATGGAAAATACGAATTTGTCAAGTGTTCTATCTACAAAAATTCCAAAAGTATTGATAGTGAACTCACCTCACTGGGTTGTGAGAGTTTGAGTTTGGATCATGTGTTTCTTTGGTTTGTTGACATCACAGAAGGTGGAGATGATTCTATGCTTAGGAGAATACAAAAAGGTGAACCGTGTGATCCTTGCAACATATCATTTGAATTCTTTCTCGAAGACAAGGACGGAGAATGGACAATGGAGGGGATAAAGGGGTGTGGGGTTTACCCCATATATGCATCTGAACATGGCTATTATTCTAAACAAAAGGGGTTAGAGTTGAAGTTTGGGTATAGCTCTAGAGATATTGTGGAGTTAGAACCCAACAGCTCTAATGATATTGATGAGTTAAAAGACAAAGGATCTAATCATGACAATGAAGATAATCAGACTAAGAAATTGCAGGAAGTTATGCACCAAACAAGTACAAAAGGTGTGCAGCATGTTAAAATGGAATCTAATGACAATTCTTCGTGTCACCATTTCATAGCTTCAACATCAGGTGGTATAAAGACAGAACCACAAAGTTTCAAGGAAGAGGATTGCTATATAATGTCAACACCTGAAAATCAAATTATCCCCTTTGACACTCTAAGTGCTTCCAACATCGATTCAAATCATACTGCTGAAGTGTCAGAAGAAAAAGACTTGACATCCAATCAAGTAGAAAAATGTTCTCAGCCAATCATGTTTGAGAAAGTTCATGCTGTTGTGGAGAACGACAATCTGCATCTTGAACTAGATTGGGATCTAATTGCTGAGCTCAACAGCATGTTATGTGATAGTTACAAGAGTTTTCCCATGCCAACTCTCTCAACTTCTGTTTCAGGTTCAAATGTAGCGGCTATCCTTGAAAAATTAGAGACCCTTTTGGTGACATCCCTTGAAACTATCTCTTGTGATGATGAAGTCAAGCAACAATTCCATCAAGTGTTGGATCAACTTGTCCAATTTGAAGACCAATTTCCTGTTCAGCTTCGTCCTGTAATTAACAAGTTAAAAGTTTTCATCGAAGGTGTTGATGTTAGATATGTGGCTGCCCAAAAAACTATCCAAAATTATGATCAGCTGCTCCAATCAAGGTCTCTTCTATCAAAGCATTTGGAAAGTGCCAAAGCTCGACAGTACCATATTAATTCTAAAGTCTCTGAAGGTAAAATACAATTTGAAAAGATCAATTCTGAGATTGTTGAACTAGAACAAAAGTTAAGGATTTTGGTTGAGACCAGAGACAAGCTAAAGAGAGACTTGGACAATTGTGATGTTGCGAATAACAAACTAAAGACTAAGGCTGCACAATGGTTGCCAAAATGCAAAAGTGTCACCACAGCTTTGAAGGAATCCGAGGCTTCTTACAAAGTGGCCCTAACCAATAAGAAGAAAACCGAAGATGAATGGGCTGATCTGAAGAAGACTTTTGTGGCCAAATGA	3654	0.3903	MGGIGKTTLAIALHAKLFSQFEGHCFLGNVRVQAEKHGLNALRRTLFSELFPGENLHVHVPKVESHFITRRLKRKKVFLILDDVASSEQLEDLIGDFNCFGPESRVIVTTRDKHIFSHVDEIYEVKELNHHDSLQLFCLNAFREKHPKNGFEELSESVLAYCKGNPLALKILGACLRSRSEQAWNSELRKLQKIPNVKIHNVLKLSFDDLDHTEQDIFLDIACFLKGEYKDHVISLLEACNLFPAIGIEVLEDKCLITISPTRTIEMHDLIQEMGWNIVQQESIEDPGRRSRLWDPEEVYDVLKYNRGTEAVEGIILDLSKIEDLHLSFNSFRKMSNIRFLKFYFGGEWSGRCKIYLPMNGLETLSDKLRYLQWHGYCLESLPSTFSAKFLVELAMPYSNLQKLWDGVQNLVNLKDINLGFCENLVEVPDLSMATNLKVLALPQCKSLRQVHPSILSLPELQVLDLEGCTEIESLQTDVHLKSLQNLRLSNCSSLKDFSVSSVELERLWLDGTHIQELPSSIWNCAKLGLISVRGCNNLDSFGDKLSHDSRMASLNNLILSGCKQLNASNLHFMIDGLRSLTFLELENSCNLRTLPESIGSLSSLQHLKLSGSNVESLPASIKNLLMLRSLYLDNCMKLVSLPELPLSPWSLSAANCTSLLTNFTQLNIPFQLEQGLEQLPESLFIPGDHVPDRFSFHAQGASVTIPHLPHVGLCGFICCLVLSRSHPNGKYEFVKCSIYKNSKSIDSELTSLGCESLSLDHVFLWFVDITEGGDDSMLRRIQKGEPCDPCNISFEFFLEDKDGEWTMEGIKGCGVYPIYASEHGYYSKQKGLELKFGYSSRDIVELEPNSSNDIDELKDKGSNHDNEDNQTKKLQEVMHQTSTKGVQHVKMESNDNSSCHHFIASTSGGIKTEPQSFKEEDCYIMSTPENQIIPFDTLSASNIDSNHTAEVSEEKDLTSNQVEKCSQPIMFEKVHAVVENDNLHLELDWDLIAELNSMLCDSYKSFPMPTLSTSVSGSNVAAILEKLETLLVTSLETISCDDEVKQQFHQVLDQLVQFEDQFPVQLRPVINKLKVFIEGVDVRYVAAQKTIQNYDQLLQSRSLLSKHLESAKARQYHINSKVSEGKIQFEKINSEIVELEQKLRILVETRDKLKRDLDNCDVANNKLKTKAAQWLPKCKSVTTALKESEASYKVALTNKKKTEDEWADLKKTFVAK*	1218

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso2g0274	1217	Gene3D	-	127	211	IPR042197	-
	Gso2g0274	1217	PRINTS	Disease resistance protein signature	71	85	-	-
	Gso2g0274	1217	PRINTS	Disease resistance protein signature	162	176	-	-
	Gso2g0274	1217	PRINTS	Disease resistance protein signature	479	495	-	-
	Gso2g0274	1217	MobiDBLite	consensus disorder prediction	848	869	-	-
	Gso2g0274	1217	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	616	973	-	-
	Gso2g0274	1217	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	1	613	-	-
	Gso2g0274	1217	Coils	Coil	1186	1206	-	-
	Gso2g0274	1217	Coils	Coil	1123	1171	-	-
	Gso2g0274	1217	Gene3D	Ribonuclease Inhibitor	504	683	IPR032675	-
	Gso2g0274	1217	Gene3D	Ribonuclease Inhibitor	302	503	IPR032675	-
	Gso2g0274	1217	MobiDBLite	consensus disorder prediction	852	869	-	-
	Gso2g0274	1217	Pfam	Leucine Rich Repeat	390	409	IPR011713	-
	Gso2g0274	1217	Gene3D	-	1	126	IPR027417	-
	Gso2g0274	1217	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1	221	IPR027417	-
	Gso2g0274	1217	Pfam	NB-ARC domain	1	197	IPR002182	GO:0043531
	Gso2g0274	1217	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	616	973	IPR044974	GO:0006952
	Gso2g0274	1217	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	1	613	IPR044974	GO:0006952
	Gso2g0274	1217	SUPERFAMILY	L domain-like	267	644	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso2g0274	Gso-Chr2	2978461	2983547	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso2g0274	3	608	WRKY Transcription Factor Family	AT4G12020	35.795	6.72e-90	318

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso2g0274	-		-	gsj:114380057	2433.29