Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0270 ATGGTGGGTGTAGGAGTGAGTGTATCCGCAGCAATGGTTGCAACTCTTTTCTTGGAAGTGGGATTGAACACTCTAATCAAAGCAGCAAACACCAATGGAATGAGTAATTTTGTTTTCATTGTCTACTCAAACTTCTTGGCTCTCTTCTTCCTTATACCCTCCACCTTCCTCTACCACAGGAAAAGAGCTCCTCCCCCAATTCCAAGCTCAATTCTCTGGAGAATTTTTCTTCTTAGTTGCCTCAGTACTGCAGTGCAGACGTTGACGTACACTGGGATCGCATATAGCTCTCCCACACTAAACTCCGCTATGTCGGACCTTGTCCCTGCTTTTACCTTCATATTTGCCATTATTTCCAGGATGGAAAATCTGAATCTGAAACTGCGTAGCAGCCATGCAAAAATTATTGGCACAGTGATCTCGATTGCAGGGGCATTGATAATCACTTTATACAAAGGAATGCCATTGACTGGCAGTTCTATGAGAAACTTAGTATTGGGTGGAAGTGAAGCTTACCTCTCAGTGCAATTAGATTGGATAATTGGTGGTTTTCTTCTTGCAACATCTAGCTTGTGCCTTTCAGTTTTGTTTATTGTTCAGGCAATATTTGTTGTATCAATGCGGAGTGTTGTATACACATGGGCAATGCGAAAGAAGGGACCCGTTTATGTAGCTATGTTTAGCCCTTTGGGAATGGTCATTGCAATTGGAATGGGGGTAATATTTCTGGGAGAGAGTCTGTATCTTGGAAGTATGATTGGAGCTGCTACAATAGGTATTGGATTTTATGCTGTGATGTGGGCTCAGGCTCAAGATGAAAAACTGGTAAATGAGAAGAATGAAAACCATGATTTTGTCACATCTTCTTCAGCTCCTCTTTTGTCTACCTAA 891 0.4186 MVGVGVSVSAAMVATLFLEVGLNTLIKAANTNGMSNFVFIVYSNFLALFFLIPSTFLYHRKRAPPPIPSSILWRIFLLSCLSTAVQTLTYTGIAYSSPTLNSAMSDLVPAFTFIFAIISRMENLNLKLRSSHAKIIGTVISIAGALIITLYKGMPLTGSSMRNLVLGGSEAYLSVQLDWIIGGFLLATSSLCLSVLFIVQAIFVVSMRSVVYTWAMRKKGPVYVAMFSPLGMVIAIGMGVIFLGESLYLGSMIGAATIGIGFYAVMWAQAQDEKLVNEKNENHDFVTSSSAPLLST* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0270 296 SUPERFAMILY Multidrug resistance efflux transporter EmrE 190 270 - -
Gso2g0270 296 Pfam EamA-like transporter family 11 149 IPR000620 GO:0016020|GO:0016021
Gso2g0270 296 PANTHER WAT1-RELATED PROTEIN 17 202 IPR030184 GO:0016021|GO:0022857
Gso2g0270 296 PANTHER WAT1-RELATED PROTEIN 204 271 IPR030184 GO:0016021|GO:0022857
Gso2g0270 296 PANTHER WAT1-RELATED PROTEIN 204 271 - -
Gso2g0270 296 PANTHER WAT1-RELATED PROTEIN 17 202 - -
Gso2g0270 296 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0270 Gso-Chr2 2917491 2920947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0270 11 296 Nodulin-like Gene Family AT3G28050 39.769 4.19e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0270 - - gmx:100793168 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0270 2 2917491 2920947 Gso2g0270 2 2917491 2920947 ECH
Gso1g0293 1 3533659 3539278 Gso2g0270 2 2917491 2920947 GST