Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0267 ATGCCATTTGGTTTGGTCTCACTCTCGGCCTGGAACAAGCGCCGTAGAAGCAAATCTCAAGATCATACAGATCCCTGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAAACACCACGACCTACAAAAAGGCTACATGGATCATCTGTTTACACACTCAAGGAGATGGAGGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTTGGCAAAGTCTATCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCTGAGGGGGAACGCGAGTTTCGAGTCGAAGTTGACATCTTGAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGTAAAGGGAACCTGCAGGATCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTGGCACTGGGAGCTGCAAAAGGACTTGCTTATCTCCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGACGATAACTTTGAAGCAAAGATATCTGATTTTGGACTCGCGAAGTTAATGCCAGAAGGGCAAGAGACACATGTGACTGCCAGAGTGCTTGGTACCTTTGGCTATTTTGATCCCGAGTATACATCGGTGAGGCACATACTGCATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGCGTTCGTACTGAGAGTAATGAAAGACCTTCAATCGTAGAATGTATAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG 969 0.4314 MPFGLVSLSAWNKRRRSKSQDHTDPWVYKPAQLWQLEDQTPRPTKRLHGSSVYTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRKGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSVRHILHDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSIVECIKELLMIIYTNSKGLGMVMHSLRMI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0267 322 ProSiteProfiles Protein kinase domain profile. 65 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0267 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Gso2g0267 322 SUPERFAMILY Protein kinase-like (PK-like) 42 307 IPR011009 -
Gso2g0267 322 Gene3D Transferase(Phosphotransferase) domain 1 144 249 - -
Gso2g0267 322 PANTHER OS01G0750732 PROTEIN 245 322 - -
Gso2g0267 322 PANTHER OS01G0750732 PROTEIN 1 244 - -
Gso2g0267 322 Pfam Protein kinase domain 66 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0267 322 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 245 322 - -
Gso2g0267 322 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 244 - -
Gso2g0267 322 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Gso2g0267 322 Gene3D Phosphorylase Kinase; domain 1 34 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0267 Gso-Chr2 2872833 2876549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0267 48 305 Receptor kinase-like Gene Family AT3G58690 38.816 5.21e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Gso2g0267 Pkinase 3.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0267 - - gmx:100777910 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0267 2 2872833 2876549 Gso2g0267 2 2872833 2876549 ECH
Gso1g0298 1 3583626 3588693 Gso2g0267 2 2872833 2876549 GST