Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0254 ATGGCTGAGGCTGTCGTTGAAATTGTGCTTGAGAAATTGAACTCACTCATTCAAAAGGAGCTGGGACTATTTTTGGGTTTCGATCAAGACATTAAAAGGATTGCCAACTTGCTCACTTCAATCAAGGCTACGCTTGAAGATGCTGAGGAGAAAAAATTCTCAAACAGAGATATTAAACATTGGCTGGGAAAGCTAAAAGATGCAGCTCGTATCCTGGATGACATCTTGGACGAGTGTGGTCCATCAGACAAGGTACAGAACTCTTACTTGTCCTCTTTTCATCCAAAGCATGTTGTTTTCCATTACAAAATTGCTAAGAACATGAAAATGATAAGAGAAAAATTAGAAAAAATTGCTAATGAAAGGACTGAGTTTAATTTGACTGAGATGGTTCGTGAGAGAAGTGGAGTCATTGAGTGGAGAAAAACCAGTTCAGTCATCACTGAACCACACATCTATGGAAGAGAAGAAGATAAGGATAAAATTATAGAATTTTTGGTTGATGATGCTTCTCATTATGAGGATTTATCTGTCTATCCAATTGTTGGTCTAGGGGGGCTTGGAAAGACAACACTTGCCCAACTCATCTTCAATCATGAGAAGGTAGTCCATCACTTTGAGTTAAGAATTTGGGTATGTGTTTCAGAAGATTTCAGCTTGAGGAGAATGACAAAAGTTATCATCGAAGAAGCAACTGGGCGTGCCCGTGAGGATATGGATCTAGAGCCACAACAAAGAGGACTTCAAGATCTGCTTCAAAGGAAAAGATATTTGCTTGTTTTGGATGATGTGTGGGATGATAAGCAAGAGAATTGGCAAAAGTTGAAATCTTTATTGGCTTGTGGGGCACCGGGCGCTTCCATCTTGGTGACTACCCGTCTATCAAAGGTTGCAGAAATCATGGGAACAATAAAGATTCCCCATGAATTATCTTTGTTATCTGACAATGATTGTTGGGAATTGTTTAAGCACCAAGCCTTTGGACCAAATGAGGTAGAACATGTAGAACTTGAGGACATAGGGAAGGAGATAGTAAAGAAGTGTGGGGGACTACCTCTTGCTGCAAAAGAACTAGGAAGTCTTTTACGCTTCGAAAGAAAGAAAAATGAGTGGCTCAATGTTAAGGAAAGAAACCTTTTGGAGTTATCACACAATGGAAACTCCATAATGGCTTCCCTGAGATTGAGTTACTTGAATTTACCAATTAGACTCAGACAGTGTTTTGCTTATTGTGCAATATTTCCCAAACACGAACAAATATGGAAGCAACAATTAGTTGAACTATGGATGGCTAATGGGCTCATTTCATCCAATGAAAGATTAGATTTCGAAGATGTTGGTGATGGTATATGGAATGAACTATATTGGAGATCATTTTTTCAGGATATTAAGAAAGATGAATTTGGCAAAGTTACAAGTTTCAAGTTGCATGGTCTTGTTCATGATCTTGCACAATCTGTCACAGAAGATGTTAGTTGCATCACAGATGACAATGGTGGAACTGTTTTGATCGAAAAAATTCACCATCTTTCAAATCATAGGTCAAGGTCTGATTCAATCCACTTGCATCAAGTGGAATCTTTGAGGACTTATCTATTGCCACATCAACATGGTGGTGCACTTTCTCCTGATGTATTGAAATGTTCTTCTTTGCGGATGCTTCACTTAGGACAAAGGGAAGAATTGTCATCTTCAATTGGCGATTTAAAACATCTAAGGTACTTGAATCTTTCTGGGGGTGAGTTTGAAACTCTTCCAGAATCACTATGTAAATTGTGGAATTTACAGATATTGAAATTAGACAACTGTCGCAATCTCAAAATATTGCCAAACAGTTTGATACTCTTAAAATATCTACAACAGTTATCTTTGAAGGATTGCTACAAACTATTAAGCTTGCCTCCTCAGATTGGCAAGTTAACTTCCCTAAGGAGTTTAACTAAGTACTTTGTTAGCAAGGAAAAAGGGTTCTTTTTGGCAGAATTGGGAGCATTGAAGCTTAAAGGAGATCTTGAGATCAAGCATTTGGGGAAAGTGAAAAGTGTAAAGGATGTCAAAGAAGCCAATATGTCAATTAAACCACTGAATAAGTTGAAATTGTCATGGGACAAATATGATGAAGAGTGGGAAATACAAGAAAATGTTAAGGAGATTCTTGAAGGGCTTTGCCCTGACACCCAACAACTTCAGAGTTTGTGGGTGGGAGGATATAAAGGTGATTATTTTCCACAATGGATATTTAGTCCTTCTCTCATGTATTTAAGGATTGAAGGATGCAGAGATGTAAAAGCTTTGGATGAGGCTTTACAACATATGACTGTCCTGCACTCGTTATCCTTATACTATCTTAGAAACCTAGAATCCTTGCCTGATTGTCTTGGAGACCTTCCCTTGCTTCGCGAATTGGCTATTGCTTTCTGTTCCAAGTTGAGGAGACTTCCAACCAGCCTACGCCTTCAAACTCTAAAAACGCTGAGGATTTGGGGTTGCCCTGACTTAGAGATGGAAACAAGACATGACTCGTCAAAAGTAGCTCACTTTCCAGAAATTAGAGTCAACGGTTATCTTATAAAAGGCTAA 2580 0.3853 MAEAVVEIVLEKLNSLIQKELGLFLGFDQDIKRIANLLTSIKATLEDAEEKKFSNRDIKHWLGKLKDAARILDDILDECGPSDKVQNSYLSSFHPKHVVFHYKIAKNMKMIREKLEKIANERTEFNLTEMVRERSGVIEWRKTSSVITEPHIYGREEDKDKIIEFLVDDASHYEDLSVYPIVGLGGLGKTTLAQLIFNHEKVVHHFELRIWVCVSEDFSLRRMTKVIIEEATGRAREDMDLEPQQRGLQDLLQRKRYLLVLDDVWDDKQENWQKLKSLLACGAPGASILVTTRLSKVAEIMGTIKIPHELSLLSDNDCWELFKHQAFGPNEVEHVELEDIGKEIVKKCGGLPLAAKELGSLLRFERKKNEWLNVKERNLLELSHNGNSIMASLRLSYLNLPIRLRQCFAYCAIFPKHEQIWKQQLVELWMANGLISSNERLDFEDVGDGIWNELYWRSFFQDIKKDEFGKVTSFKLHGLVHDLAQSVTEDVSCITDDNGGTVLIEKIHHLSNHRSRSDSIHLHQVESLRTYLLPHQHGGALSPDVLKCSSLRMLHLGQREELSSSIGDLKHLRYLNLSGGEFETLPESLCKLWNLQILKLDNCRNLKILPNSLILLKYLQQLSLKDCYKLLSLPPQIGKLTSLRSLTKYFVSKEKGFFLAELGALKLKGDLEIKHLGKVKSVKDVKEANMSIKPLNKLKLSWDKYDEEWEIQENVKEILEGLCPDTQQLQSLWVGGYKGDYFPQWIFSPSLMYLRIEGCRDVKALDEALQHMTVLHSLSLYYLRNLESLPDCLGDLPLLRELAIAFCSKLRRLPTSLRLQTLKTLRIWGCPDLEMETRHDSSKVAHFPEIRVNGYLIKG* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0254 859 Gene3D - 137 305 IPR027417 -
Gso2g0254 859 SUPERFAMILY L domain-like 476 832 - -
Gso2g0254 859 PRINTS Disease resistance protein signature 178 193 - -
Gso2g0254 859 PRINTS Disease resistance protein signature 251 265 - -
Gso2g0254 859 PRINTS Disease resistance protein signature 348 362 - -
Gso2g0254 859 PRINTS Disease resistance protein signature 590 606 - -
Gso2g0254 859 PANTHER DISEASE RESISTANCE PROTEIN RP 41 815 IPR044974 GO:0006952
Gso2g0254 859 Coils Coil 31 51 - -
Gso2g0254 859 PANTHER - 41 815 - -
Gso2g0254 859 Gene3D Ribonuclease Inhibitor 498 681 IPR032675 -
Gso2g0254 859 Gene3D Ribonuclease Inhibitor 687 845 IPR032675 -
Gso2g0254 859 Pfam Rx N-terminal domain 5 80 IPR041118 -
Gso2g0254 859 Gene3D - 5 119 - -
Gso2g0254 859 Pfam NB-ARC domain 155 397 IPR002182 GO:0043531
Gso2g0254 859 Gene3D - 397 487 IPR036388 -
Gso2g0254 859 CDD RX-CC_like 2 120 IPR038005 -
Gso2g0254 859 Gene3D - 312 396 IPR042197 -
Gso2g0254 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 411 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0254 Gso-Chr2 2754686 2758787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0254 175 779 WRKY Transcription Factor Family AT5G45050 22.046 5.09e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0254 - - gmx:100787353 1722.21