Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0251 ATGTCGGTCTCCTGCTCCAACTGCTTCCCCGACGACGACGACTCCTTCCTTCTCTGCGGCGAGGACTCCTCCGGAATCATCGATTCCTCGCCGGAGTGTTCCTCTGACCTCGATTCTCCCCCGCCTTCGGAGGCGGAGGCGGAATCCATAGCCGGATTCATCGAAGACGAGCGCAACTTCGTCCCCGGATTTGAATACCTCAACAGGTTTCAATCTCGCTCTCTCGACGCTTCTGCCAGAGAAGAATCGGTTGCATGGATTCTCAAGGTGCAGGCTTATTACGCTTTTCAACCACTCACTGCTTATCTTTCCGTCAACTACTTGGATCGGTTCTTGAATTCTCGGCAGTTGCCGCAAACGAATGGGTGGCCACTGCAACTTCTCTCTGTTGCCTGTTTGTCTTTAGCAGCAAAGATGGAGGAACCTCTAGTTCCGTCTCTGTTGGACCTTCAGGTAGAAGGTGCCAAATACGTATTTGAGCCCAAAACAATTAGAAGGATGGAGCTACTTGTTCTGGGCGTGTTGGATTGGAGGCTAAGATCGGTTACCCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCATCTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACACAAATTATCTTGTCTAATATCCAAGAGGCTAGCTTTCTTGCGTATTGGCCATCATGCATTGCTGCAGCGTCCATTCTCCATGCAGCAAATGAGATTCCTAATTGGTCTTTCGTTAGGCCTGAGCATGCAGAGTCATGGTGTGAGGGGCTTAGAAAGGAGAAAGTTATAGGGTGCTACCAATTAATGCAAGAACTTGTGATTAACAATAACCGGAGGAAACCCCCTAAAGTGTTACCACAGCTGCGAGTGACATCTCGGCCCATCATGAGGTCTAGTGTCTCATCATTCTCAGCATCATCATCCTTTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAATTAAATAACTCTTTGTGGGTAGATGATGACAAAGGAAACTCCAAATGA 1020 0.4784 MSVSCSNCFPDDDDSFLLCGEDSSGIIDSSPECSSDLDSPPPSEAEAESIAGFIEDERNFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHAANEIPNWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPIMRSSVSSFSASSSFSPSSSLSCKRRKLNNSLWVDDDKGNSK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0251 339 CDD CYCLIN 86 172 IPR013763 -
Gso2g0251 339 Gene3D - 54 243 - -
Gso2g0251 339 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Gso2g0251 339 SUPERFAMILY Cyclin-like 45 179 IPR036915 -
Gso2g0251 339 SUPERFAMILY Cyclin-like 164 283 IPR036915 -
Gso2g0251 339 Pfam Cyclin, N-terminal domain 52 179 IPR006671 -
Gso2g0251 339 PANTHER CYCLINS 1 329 IPR039361 -
Gso2g0251 339 SMART cyclin_7 85 173 IPR013763 -
Gso2g0251 339 Gene3D - 63 180 - -
Gso2g0251 339 SMART Cyclin_C_2 182 315 IPR004367 -
Gso2g0251 339 Pfam Cyclin, C-terminal domain 182 292 IPR004367 -
Gso2g0251 339 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0251 Gso-Chr2 2731239 2734845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0251 1 338 Core Cell Cycle Gene Families AT1G70210 62.353 1.11e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0251 K18810 - gmx:100775224 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0309 1 3728584 3732485 Gso2g0251 2 2731239 2734845 GST
Gso2g0251 2 2731239 2734845 Gso18g1080 18 18905355 18910012 PCT
Gso18g1080 18 18905355 18910012 Gso2g0251 2 2731239 2734845 PCT