Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0241 ATGAGCTCATCCTCAGAGAAGAAACCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCAGTGTTGAAGGTATTTGGTTCCCCTTTGACGGCTATGAGAAGTGACGAGGCTCTCAGAGATGGCTGGGTTAAGAAAATCGAGTGTCCTTTCTGCCATCGCGAGTTTCAGAGTTTGCAAGCTCTAGGGGGACACCAAAATGCGCATAGGAGAGAAAGACAAATGGCTAGGTTTGCCCAATTTGAATATATGTGTCTGAATCAAAGCAACCAAATGTTCCAATCGGTTACACCTCTTGTGGTTGAGCATGGAGCAGCACCAACCTCTGTTTTCGGTGGTGCAACTCGGTTATGGACAGCACCTGAGTCATCACAGCTACCTGTGGCGGAGCCACCAGGTATGCTTATCCCTATTGTACAAGCACCAGTAGTAGGGGATGATGATAATATCGACCTAGAACTGAGACTAGGTAATTCTTCTAAGTAA 480 0.4583 MSSSSEKKPSSSSSSSSPSVLKVFGSPLTAMRSDEALRDGWVKKIECPFCHREFQSLQALGGHQNAHRRERQMARFAQFEYMCLNQSNQMFQSVTPLVVEHGAAPTSVFGGATRLWTAPESSQLPVAEPPGMLIPIVQAPVVGDDDNIDLELRLGNSSK* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0241 159 PANTHER ZINC FINGER PROTEIN 6-LIKE 3 158 - -
Gso2g0241 159 SUPERFAMILY beta-beta-alpha zinc fingers 44 73 IPR036236 -
Gso2g0241 159 MobiDBLite consensus disorder prediction 1 21 - -
Gso2g0241 159 Pfam C2H2-type zinc finger 46 70 - -
Gso2g0241 159 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Gso2g0241 159 PANTHER ZINC FINGER PROTEIN 5 3 158 IPR044299 GO:0010090
Gso2g0241 159 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0241 Gso-Chr2 2575203 2575682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0241 47 155 C2H2 Transcription Factor Family AT3G53820 31.304 2.27e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0241 - - gmx:102669330 295.434