Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0231 ATGGACACGGACAGCTTCGTTTCCTTCGATCATGTTTCGCCGGAGGATTCCCACGAGGTTCATGTCTTGGCCGTTGATGACAGCCTCGTCGATCGAAAGGTCATTGAACGCTTGCTTAAAATCTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAGTTTCTGGGGCTGGACGAGCAGAGAAGGACCTCTGAATCTGATGGTTTTGTCCCGGATTTGAAGGTGGATCTAATTATCACTGACTACTGCATGCCCGAAATGACCGGTTACGAGTTGCTCAAGAAAATCAAGGAATCGACCATGTTCAGAGAAATTCCAGTAGTGATCATGTCTTCCGAAAACATTTTGCCGCGCATAGACAGATGTTTGGAAGAAGGTGCAGAGGATTTCATAGTAAAGCCAGTGAAATTATCTGATGTAAAACGGTTAAAGGGTTACATGACACCCAAAGAGGTTATTAAGATGAGAAGCCAAGAAGACAGAAGAAGTGATGGCTATGTTAACGGTGGTGATGGTGGTGTTCTGGAGATAAACAACAAAAGAAAGCTGGAAGAGCAAGACACCTCTGACGTGTCATTATCACCACCGTCAACTTCTACCCTTTCATCATCACCGTCCGTTTCCTCACCATCACCGTCATCTTCTCCTACTTCTTCAGCCAGCGTGCTTGCCTCTCCAATCAGACGGCTTAAAATGACCAGCACCGATTGA 723 0.4592 MDTDSFVSFDHVSPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPDLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTPKEVIKMRSQEDRRSDGYVNGGDGGVLEINNKRKLEEQDTSDVSLSPPSTSTLSSSPSVSSPSPSSSPTSSASVLASPIRRLKMTSTD* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0231 240 MobiDBLite consensus disorder prediction 193 240 - -
Gso2g0231 240 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
Gso2g0231 240 SUPERFAMILY CheY-like 20 146 IPR011006 -
Gso2g0231 240 CDD REC_typeA_ARR 22 147 - -
Gso2g0231 240 Gene3D - 20 198 - -
Gso2g0231 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 239 - -
Gso2g0231 240 MobiDBLite consensus disorder prediction 159 240 - -
Gso2g0231 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 239 IPR045279 GO:0009736
Gso2g0231 240 SMART REC_2 20 151 IPR001789 GO:0000160
Gso2g0231 240 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0231 Gso-Chr2 2440784 2442209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0231 14 232 Response Regulator Gene Family AT1G59940 56.579 9.74e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso2g0231 Response_reg 1.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0231 K14492 - gmx:100787696 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0231 2 2440784 2442209 Gso2g0231 2 2440784 2442209 ECH
Gso1g0323 1 3995156 3996512 Gso2g0231 2 2440784 2442209 GST
Gso2g0231 2 2440784 2442209 Gso18g1066 18 18265558 18266907 PCT
Gso18g1066 18 18265558 18266907 Gso2g0231 2 2440784 2442209 PCT