Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0230 ATGTATTTGAACATGATGCTTCTTCTTCTTGTGATCCTTTTTGTTTTACAAGGTTTTCCAATACCAACATGCTATTGCCAGACCAATACTCCTCAGAACATTGAAACATTTTATCCAATTCAAACACCCAAACCACCCCTCCTAATCCAACCTCCTGAGGCACAACCAAAGCCACAAGCATCACCACCATCACCAAGACCAGTGGCTGCATCAAAAACCTCTTCATCAAGCAGTAAGATCGGAACAGCGGTGGCTGCAACAGCAGCAGGTACTCTAGTTGTTTCTGGTTTGATTTTCTTCTTGGTTCAAAGGTGCTTCAGAGCAAGGAAGAGAAAGGAGGCCAAAAACAACACTGCTTCCGCTGTGGATAGGCGCGTTGTGCCTCAGGTAGACGTGTTCAAGAGAATGGAAGGGAACGTCAAGGGACTAATTGTTGATGATGATGGTTTGGATGTGGTTTACTGGAGAAAACTCGAAGGTAAGAAATTACCTGACAAGGATTTCCAAAGGGAGGTTTTGGATAGCACCGAAGACAAAATAGAAGATGATCATGAGGGGAACAATGGGAAAAGATCTGAGTCCATTCAAGAAACTCTTCTGCTTAGAGACAGATCTTCAGCATCTCACATGAATATATTTCTTCCAGAACAGTCATATACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCAGTGTTCCTTCATCAATTGGAGGCTCTTCTACTCAACTATCTTCTCCACCCTTTACCCCTTCATCACCAAAACCACTCAACACTTTTTTCTCATCAATTCCAAACACGTCAAGTCCTGCACCACCAATTCCGCCTCCAACAATACCTGATAGAAATAATCAAGCACCAGCACCACCTCCTCCTCCACCACCAATCCCGGGTATAAAAAGCTCAGCACTGCCTCTGCCTCCTCCTCCACCAATCCCAGTTAAAAAGAGCTCAACGCCTCCACCACCTCCTCCACCAATTCCTCCTAGAAAGAGTCCAGCACCACCTCCTCCTCCACCAAAGGCACATGGTTTGAAGTCATCATCAAAACCACCACCTACCCCTATTGAAAGAACACCAAGTACCACAAGTAAAGAAGGCAACACTTCACCTGAGGTAAAACTGAAGCCATTACATTGGGATAAGGTGACTACCAACCTTGATCACTCTATGGTATGGGACAAAATGGACCGAGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTTTTCGGGTTAGTGGCTGCCAACCGAAATGACAGTACCCCAAAAGTAAATAATTCAATGAGTCCTAGCAGGGATGCTTTGGCTCCATCAGTGAATACCTTCATTCTTGACCCCAGAAAATCACAAAACATTGCTATTGTTTTGAAGTCTCTGGCGGTCTCGCGCAAAGAAATTATTGAAGCACTCATTGATGGTCAAGGCCTTAATGCAGACACCATCGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAAACACTTATAGTTGCATATGAAGGAAACCCTTCAAAACTTGCTGCAGCTGAATCTTTCCTACATCACATCCTCAGAGCAGTTCCTTCGGCATTTAAGCGCTTGAATGCTTTGTTATTCAGGTTGAATTATGATTCTGAGATTGTAGAAATCAAGGAGTTTCTGCAGACACTTGCACTGGGGTGCAAGGAGCTTCGAAACCAAGGAATGTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCCGGAAATCGCATGAATGCAGGCACTCAAAGGGGCAATGCTCAAGCTTTCAACTTGGTTTCTCTCAGAAAGCTCTCTGATGTCAAGAGTACTGATGGAAAAACCACATTGCTTCGCTTTGTGGTTGAAGAAGTAGTTCGTGCGGAAGGAAAACGCGCTGTTCTTAACCGCAATCACAGTTTGAGCCGTAGTAGCAGTAGGAACAGCAACAGCAGTGTGGACTCTCAAAACTCTGCTGTTTCAAATGAACAAAGGCAAAGGGAATACATAACACTAGGATTGCCAGTTGTAGGAGGGATCAGTTCCGAGTTTTCCAACTTAAGGAAAGCTGCGGTTACAGATTACAAAAGTTTTGTTGGTTCAATCTCATCACTCTCAGCTAGGATTGTTGAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAAGGAGGCAACTTTGTGAGAGAAATGAACAATTTTCTTGAAAATGCTGAGGAGGAACTTAGATTAGTGAGGGAGGAGCAAACAAGGGTAATGCAGCTTGTCAAAAGAACAACAGATTATTATCAAGGAGGATCTTCAAAAGAGAGTGCAGAAAACCCTCTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGAAAGACAAAGACATCTTTGTAA 2415 0.4356 MYLNMMLLLLVILFVLQGFPIPTCYCQTNTPQNIETFYPIQTPKPPLLIQPPEAQPKPQASPPSPRPVAASKTSSSSSKIGTAVAATAAGTLVVSGLIFFLVQRCFRARKRKEAKNNTASAVDRRVVPQVDVFKRMEGNVKGLIVDDDGLDVVYWRKLEGKKLPDKDFQREVLDSTEDKIEDDHEGNNGKRSESIQETLLLRDRSSASHMNIFLPEQSYTIMRIPPPAPPPSVPSSIGGSSTQLSSPPFTPSSPKPLNTFFSSIPNTSSPAPPIPPPTIPDRNNQAPAPPPPPPPIPGIKSSALPLPPPPPIPVKKSSTPPPPPPPIPPRKSPAPPPPPPKAHGLKSSSKPPPTPIERTPSTTSKEGNTSPEVKLKPLHWDKVTTNLDHSMVWDKMDRGSFRVDDDLMEALFGLVAANRNDSTPKVNNSMSPSRDALAPSVNTFILDPRKSQNIAIVLKSLAVSRKEIIEALIDGQGLNADTIEKLGRVAPTEEEQTLIVAYEGNPSKLAAAESFLHHILRAVPSAFKRLNALLFRLNYDSEIVEIKEFLQTLALGCKELRNQGMFVKLLEAVLKAGNRMNAGTQRGNAQAFNLVSLRKLSDVKSTDGKTTLLRFVVEEVVRAEGKRAVLNRNHSLSRSSSRNSNSSVDSQNSAVSNEQRQREYITLGLPVVGGISSEFSNLRKAAVTDYKSFVGSISSLSARIVEIRELVSQCGNDKGGNFVREMNNFLENAEEELRLVREEQTRVMQLVKRTTDYYQGGSSKESAENPLYLFVIVKDFLGMVDQACIEIARNMQKRKTKTSL* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0230 804 SMART it6_source 365 799 IPR015425 -
Gso2g0230 804 MobiDBLite consensus disorder prediction 48 74 - -
Gso2g0230 804 Coils Coil 723 750 - -
Gso2g0230 804 MobiDBLite consensus disorder prediction 175 191 - -
Gso2g0230 804 MobiDBLite consensus disorder prediction 175 196 - -
Gso2g0230 804 MobiDBLite consensus disorder prediction 223 377 - -
Gso2g0230 804 PANTHER FORMIN-LIKE PROTEIN 4 305 802 - -
Gso2g0230 804 PANTHER FORMIN-LIKE PROTEIN 4 5 317 - -
Gso2g0230 804 PANTHER FORMIN-RELATED 305 802 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso2g0230 804 PANTHER FORMIN-RELATED 5 317 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso2g0230 804 MobiDBLite consensus disorder prediction 48 65 - -
Gso2g0230 804 MobiDBLite consensus disorder prediction 268 346 - -
Gso2g0230 804 SUPERFAMILY Formin homology 2 domain (FH2 domain) 444 800 - -
Gso2g0230 804 Gene3D Formin, FH2 domain 387 803 IPR042201 -
Gso2g0230 804 Pfam Formin Homology 2 Domain 369 784 IPR015425 -
Gso2g0230 804 MobiDBLite consensus disorder prediction 632 659 - -
Gso2g0230 804 ProSiteProfiles Formin homology-2 (FH2) domain profile. 365 804 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0230 Gso-Chr2 2426438 2429651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0230 8 799 FH2 protein (formin) Gene Family AT1G70140 43.564 0.0 585
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0230 2 2426438 2429651 Gso2g0230 2 2426438 2429651 ECH
Gso1g0324 1 4010690 4013818 Gso2g0230 2 2426438 2429651 GST
Gso2g0230 2 2426438 2429651 Gso18g1064 18 18225583 18228353 PCT
Gso18g1064 18 18225583 18228353 Gso2g0230 2 2426438 2429651 PCT