Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0220 ATGGCGGAGGCAGTTCTTGAAGTTGCACTCGAAAAGTTGAGCTCTCTCATTGAAAAAGAGCTGGGATTATTCCTTGATTTCGATCGAGACATGAAAAAGCTTCGCAGCATGTTCACTACAATCAAGGCTACCCTTCAAGATGCTGTGGAGAAACAATTCTCAGACGAAGCTATAAAGGATTGGCTGCCAAAGCTAAAAGAAGCAGCTTACGAGCTGGATGATATCTTGGACGAGTGTGCCTATGAAGCATTGGGGTTGGAGTACCAAGGAGTCAAGTCTGGTCAATCACACAAGGTACAATGCTCTTGCTTATCCTCTTTTCATCCCAAGCATGTTGTTTTCCGATACAAAATTGCCAAGAGAATGAAAAGGATAACTGAGAGATTAGATGAAATTGCAGAAGAAAGGCAGAAGTTTCATTTGACTAAGACGGCTCTAGAGAGAACTAGAATCATTGAGTGGCGCCAAACTAGCTCAATCATCAGTGAACGACAAGTCTATGGAAGGGAAGAAGATACAAAAAAGATTGTAGACGTTTTGATGGCTAATGCTGATGCTTATCATTCTGAGAGTTTATTAGTTTATCCAATAGTAGGTCTAGGCGGACTTGGAAAAACAACACTTGCCCAACTCATCTTTAATCATAAGATGGTAATCAACAAGTTTGAGATAAGAATGTGGGTATGTGTTTCTGAAGATTTCAGTTTGAATAGAATGACAAAAGCTATAATAGAAGCAGCATCTGGGCAGGCTTGCGAGAATTTGGATCTAGACCTGCTACAAAGGAAACTTCAAGATTTGCTTCGAGGAAAGAGATATTTGCTTGTTTTGGATGATGTGTGGGATGATAAGCCAAATAATTGGCAGAAGTTTGAACGTGTATTGGCTTGTGGGGCAAATGGTGCTTCTATTTTGGTCACTACTCGTCTTCCAAAGGTTGCAACAATCATGGGAACAATGCCTCCTCATGAATTATCAATGTTATCCGAGGATGAAGGTTGGGAATTGTTCAAACACCAAGTCTTTGGACCAAATGAGGAAGAACAAGTAGAGCTTGTTGTCGCAGGGAAGGAGATAGTAAAGAAGTGTGGGGGAGTGCCTCTTGCAATAAAAGCACTAGGAGGAATTTTACGCTTCAAAAGAAAAGAAAATGAGTGGCTTCATGTTAAGGAAAGCAATCTTTGGAATTTACCACACAATGAAAACTCCATAATGCCTGTCTTGAGATTAAGTTACCTGAACTTACCAATAAAACTAAGACAATGTTTTGCTCATCTTGCAATATTTCCCAAACATGAAATAATAATAAAACAATATTTAATTGAATGTTGGATGGCTAATGGATTCATTTCATCTAATGAAATATTAGATGCTGAAGATGTTGGTGATGGAGTGTGGAATGAATTATATTGGAGATCATTTTTTCAGGATATCAAGACAGATGAATTTGGCAAAGTTAGAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCACAATCTGTTGCAAAAGATGTTTGTTGCATTACAAAAGACAATAGTGCAACTACTTTTCTCGAAAGAATCCATCATCTCTCAGATCATACCAAGGAAGCCATTAATCCAATTCAGTTGCATAAAGTCAAATATTTGAGGACCTATATAAATTGGTATAATACTAGCCAATTCTGTTCTCATATATTAAAATGTCATTCTTTGCGGGTGCTTTGGTTGGGACAAAGGGAAGAATTGTCATCTTCAATTGGTGATTTAAAACATCTAAGGTACTTGAATCTTTGTGGGGGACATTTCGTTACTCTTCCAGAATCGCTATGTAGATTGTGGAATTTGCAGATATTGAAACTAGACCATTGTTATCATCTGCAAAAATTGCCTAATAATTTGATACAATTAAAGGCCCTTCAACAACTATCTTTGAATAACTGCTGGAAACTATCAAGCTTGCCTCCTTGGATAGGAAAGTTGACTTCCCTAAGGAATTTATCCACTTACTATATTGGCAAGGAAAAAGGGTTCCTTTTGGAAGAATTAAGACCACTGAAGCTGAAAGGAGGTCTTCACATTAAGCATATGGGAAAAGTTAAAAGTGTATTGGACGCCAAAGAGGCCAATATGTCAAGCAAGCAATTGAACCGATTGTCTTTGTCATGGGATAGAAATGAAGAGTCTGAATTACAAGAAAACATGGAGGAGATTCTTGAAGCGCTTCAACCTGATACCCAACAACTTCAGAGTTTGACCGTGTTAGGATATAAAGGTGCTTATTTCCCACAGTGGATGTCTTCTAGTCCTTCTCTCAAGAAATTAGTAATTGTAAGGTGTTGCAAGTTAAATGTGTTGGCAAGTTTTCAATGCCAAACTTGTCTTGACCATTTGACAATTCATGACTGTAGAGAGGTGGAAGGTTTGCATGAGGCTTTCCAACATTTGACTGCCTTGAAGGAGTTAGAATTATCTGATCTTCCAAACCTAGAATCCTTGCCCAACTGCTTTGAAAATCTTCCCTTGCTTCGCAAATTGACTATTGTAAACTGTCCCAAGTTGACGTGTCTTCCATCTAGCCTAAACCTTAGCAGTCTAGAACGATTGACGATTGATGCTTGCCCTGAGTTGAAGAAGCTTACATTCCCCATATTAGACCATGACGATGAATAA 2655 0.3838 MAEAVLEVALEKLSSLIEKELGLFLDFDRDMKKLRSMFTTIKATLQDAVEKQFSDEAIKDWLPKLKEAAYELDDILDECAYEALGLEYQGVKSGQSHKVQCSCLSSFHPKHVVFRYKIAKRMKRITERLDEIAEERQKFHLTKTALERTRIIEWRQTSSIISERQVYGREEDTKKIVDVLMANADAYHSESLLVYPIVGLGGLGKTTLAQLIFNHKMVINKFEIRMWVCVSEDFSLNRMTKAIIEAASGQACENLDLDLLQRKLQDLLRGKRYLLVLDDVWDDKPNNWQKFERVLACGANGASILVTTRLPKVATIMGTMPPHELSMLSEDEGWELFKHQVFGPNEEEQVELVVAGKEIVKKCGGVPLAIKALGGILRFKRKENEWLHVKESNLWNLPHNENSIMPVLRLSYLNLPIKLRQCFAHLAIFPKHEIIIKQYLIECWMANGFISSNEILDAEDVGDGVWNELYWRSFFQDIKTDEFGKVRSFKMHDLVHDLAQSVAKDVCCITKDNSATTFLERIHHLSDHTKEAINPIQLHKVKYLRTYINWYNTSQFCSHILKCHSLRVLWLGQREELSSSIGDLKHLRYLNLCGGHFVTLPESLCRLWNLQILKLDHCYHLQKLPNNLIQLKALQQLSLNNCWKLSSLPPWIGKLTSLRNLSTYYIGKEKGFLLEELRPLKLKGGLHIKHMGKVKSVLDAKEANMSSKQLNRLSLSWDRNEESELQENMEEILEALQPDTQQLQSLTVLGYKGAYFPQWMSSSPSLKKLVIVRCCKLNVLASFQCQTCLDHLTIHDCREVEGLHEAFQHLTALKELELSDLPNLESLPNCFENLPLLRKLTIVNCPKLTCLPSSLNLSSLERLTIDACPELKKLTFPILDHDDE* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0220 884 SUPERFAMILY L domain-like 490 873 - -
Gso2g0220 884 CDD RX-CC_like 2 134 IPR038005 -
Gso2g0220 884 Pfam Rx N-terminal domain 5 92 IPR041118 -
Gso2g0220 884 Gene3D - 148 320 IPR027417 -
Gso2g0220 884 Gene3D Ribonuclease Inhibitor 695 879 IPR032675 -
Gso2g0220 884 Gene3D Ribonuclease Inhibitor 524 677 IPR032675 -
Gso2g0220 884 PANTHER - 39 853 - -
Gso2g0220 884 Pfam NB-ARC domain 171 412 IPR002182 GO:0043531
Gso2g0220 884 Gene3D - 412 502 IPR036388 -
Gso2g0220 884 Gene3D - 5 142 - -
Gso2g0220 884 PANTHER DISEASE RESISTANCE PROTEIN RP 39 853 IPR044974 GO:0006952
Gso2g0220 884 PRINTS Disease resistance protein signature 194 209 - -
Gso2g0220 884 PRINTS Disease resistance protein signature 267 281 - -
Gso2g0220 884 PRINTS Disease resistance protein signature 363 377 - -
Gso2g0220 884 PRINTS Disease resistance protein signature 808 824 - -
Gso2g0220 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 426 IPR027417 -
Gso2g0220 884 Gene3D - 327 411 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0220 Gso-Chr2 2312279 2317564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0220 197 649 WRKY Transcription Factor Family AT5G45050 21.429 1.41e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0220 - - gmx:100775587 1761.5