Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0205 ATGTCTCCATCCATCTTCACCATCATTCTCCTCTCCTTCCTCCTCTTCTCCACACCTTCCAAGTCTCAAACACCATCATGCTCTTCCAATTTAAACACAAGCACACACACCTGCCCTCCATTTCCTTCTAATAATCCCCCTTACCCATTCTCATCTACTCCAGGCTGTGGCCACCCTTCCTTCCACCTAACTTGCTCCACCCCTCACTCCCAAATCTCCATCAACAACTTCTCTTTCTCCATCCTCTCCTATAACCCCAACACCTCCTCCATCACTCTCTCCCCTCACCAACAACACCCCAACAACATTTTCCCTTCCATCCCCACTCACCCCATCAACCTCTCTTCCACCCCTTTCCGCATCTCCGCCGCCACCTGCTCCCGCCTCTCCTTCCTCCGCCCCTGCTTCCCCCCTCCTCCCCTCCCCAACTGCTCCCACTCCCCCTTCCAATGCCACCTCCTCAAAAACCCCTCCCACCTCCTCCACGACTGCGCTTCCACCCACCACCACTCCTCCTCCGACACCGACCAGTCCTCCGCCTGCCAGACCGACATCCTCGGCTTCCTCGAAGAGCTCCTCCAGACCGGAATCCAGCTCGACTGGGACGAAACTCGTGATCCTTATTTCACCAACTGCTCCTCCTGCCGTTCAACCAACAACGGCATCTGCGGCTTCAATTTTTCCTCCCCAAACTACCCTTTCCAGTGCTTCCATTTCCACCCCGAATCCACACTCTCCCCTCCCTGGTTCCGCAAATTTAAACCCAGCAAAATCGCCATCTTCACCACCATCATCACCTTAACCTCCCTAATCCTTATAATTTCAGTCACCACCGCCATGCTCCGCAGATCAAAAGCTTCATCAGCAACACAACAAGACCCTAATACCCTCTTCCTCCACAACCACCGCTCCGCAAGCCTCCTCCCTCCCGCTTTCACCTACGAAGATTTAGCTCTTTCAACCAACAACTTCGATTCAAAACGGATAATCGGCGACGGCGGGTTCGGCTCCGTCTACCTAGCAAACCTCCGCGACGGGCGGCTCGCCGCGGTGAAGTACCTCCACCGCCACCACGCCGTTTCCGCCGCGTTCTCCACCAAATCCTTCTGCAACGAGATTCTCATCCTCTCTTCCATCAACCACCCGAACCTCGTGAAGCTTCACGGATACTGTAGCGACCCGAGGGGGCTTCTTTTAGTCTACGATTACATCCCTAACGGAACCCTAGCGGAACACCTGCATAACCGTAAGGGCTCGCTGACGTGGCAGGTGAGGCTCGACATCGCGTTGCAAACGGCGTTAGCGATGGAGTATCTTCACTTCTCGGTGGTGCCGCCGATTGTGCACAGGGACATAACGTCGTCGAATATTTTCGTGGAGAGGGATATGAGGATTAAGGTTGGGGATTTTGGACTTTCGAGGCTTTTGGTGGTGCAGGATAATAACACCACGTCGTCTTCGAACGGGTTTGTGTGGACCGGGCCGCAAGGGACGCCGGGCTATTTGGACCCAGATTATCACCGGTCCTTCCGGTTAACCGAGAAGAGTGACGTGTACAGTTTTGGAGTGGTGTTGCTGGAGCTTATTTCGGGGCTGAGAGCGGTTGATCAGAATAGGGACAAGCGCGAAATGGCGCTTGCGGATTTGGTTGTTTCGCGGATCCAGATGGGGCAGTTACATCAAGTGCTCGACCCGGTTCTTGACTGCGCCGACGGCGGCGTTGCCGCCGTCGCGGAGCTTGCTTTCCGGTGTGTCGCGGCCGATAAGGACGACAGGCCGGACGCCAGGGAGGTGGTGGAGGAGCTGAAGCGGGTGCGCAACAGAGCCGTTACGGCGGCGAAGGAGTGA 1848 0.5579 MSPSIFTIILLSFLLFSTPSKSQTPSCSSNLNTSTHTCPPFPSNNPPYPFSSTPGCGHPSFHLTCSTPHSQISINNFSFSILSYNPNTSSITLSPHQQHPNNIFPSIPTHPINLSSTPFRISAATCSRLSFLRPCFPPPPLPNCSHSPFQCHLLKNPSHLLHDCASTHHHSSSDTDQSSACQTDILGFLEELLQTGIQLDWDETRDPYFTNCSSCRSTNNGICGFNFSSPNYPFQCFHFHPESTLSPPWFRKFKPSKIAIFTTIITLTSLILIISVTTAMLRRSKASSATQQDPNTLFLHNHRSASLLPPAFTYEDLALSTNNFDSKRIIGDGGFGSVYLANLRDGRLAAVKYLHRHHAVSAAFSTKSFCNEILILSSINHPNLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHNRKGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDNNTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQNRDKREMALADLVVSRIQMGQLHQVLDPVLDCADGGVAAVAELAFRCVAADKDDRPDAREVVEELKRVRNRAVTAAKE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0205 615 ProSitePatterns Tyrosine protein kinases specific active-site signature. 447 459 IPR008266 GO:0004672|GO:0006468
Gso2g0205 615 ProSiteProfiles Protein kinase domain profile. 324 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0205 615 CDD STKc_IRAK 330 604 - -
Gso2g0205 615 SUPERFAMILY Protein kinase-like (PK-like) 305 602 IPR011009 -
Gso2g0205 615 Pfam Protein tyrosine and serine/threonine kinase 327 602 IPR001245 GO:0004672|GO:0006468
Gso2g0205 615 Coils Coil 595 615 - -
Gso2g0205 615 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 610 IPR045274 GO:0007166
Gso2g0205 615 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 27 610 - -
Gso2g0205 615 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Gso2g0205 615 Gene3D Phosphorylase Kinase; domain 1 300 403 - -
Gso2g0205 615 Gene3D Transferase(Phosphotransferase) domain 1 404 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0205 Gso-Chr2 2147902 2150450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0205 6 612 Receptor kinase-like Gene Family AT1G69910 57.953 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso2g0205 PK_Tyr_Ser-Thr 6.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0205 - - gmx:100816739 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0205 2 2147902 2150450 Gso2g0205 2 2147902 2150450 ECH