Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso2g0205 | ATGTCTCCATCCATCTTCACCATCATTCTCCTCTCCTTCCTCCTCTTCTCCACACCTTCCAAGTCTCAAACACCATCATGCTCTTCCAATTTAAACACAAGCACACACACCTGCCCTCCATTTCCTTCTAATAATCCCCCTTACCCATTCTCATCTACTCCAGGCTGTGGCCACCCTTCCTTCCACCTAACTTGCTCCACCCCTCACTCCCAAATCTCCATCAACAACTTCTCTTTCTCCATCCTCTCCTATAACCCCAACACCTCCTCCATCACTCTCTCCCCTCACCAACAACACCCCAACAACATTTTCCCTTCCATCCCCACTCACCCCATCAACCTCTCTTCCACCCCTTTCCGCATCTCCGCCGCCACCTGCTCCCGCCTCTCCTTCCTCCGCCCCTGCTTCCCCCCTCCTCCCCTCCCCAACTGCTCCCACTCCCCCTTCCAATGCCACCTCCTCAAAAACCCCTCCCACCTCCTCCACGACTGCGCTTCCACCCACCACCACTCCTCCTCCGACACCGACCAGTCCTCCGCCTGCCAGACCGACATCCTCGGCTTCCTCGAAGAGCTCCTCCAGACCGGAATCCAGCTCGACTGGGACGAAACTCGTGATCCTTATTTCACCAACTGCTCCTCCTGCCGTTCAACCAACAACGGCATCTGCGGCTTCAATTTTTCCTCCCCAAACTACCCTTTCCAGTGCTTCCATTTCCACCCCGAATCCACACTCTCCCCTCCCTGGTTCCGCAAATTTAAACCCAGCAAAATCGCCATCTTCACCACCATCATCACCTTAACCTCCCTAATCCTTATAATTTCAGTCACCACCGCCATGCTCCGCAGATCAAAAGCTTCATCAGCAACACAACAAGACCCTAATACCCTCTTCCTCCACAACCACCGCTCCGCAAGCCTCCTCCCTCCCGCTTTCACCTACGAAGATTTAGCTCTTTCAACCAACAACTTCGATTCAAAACGGATAATCGGCGACGGCGGGTTCGGCTCCGTCTACCTAGCAAACCTCCGCGACGGGCGGCTCGCCGCGGTGAAGTACCTCCACCGCCACCACGCCGTTTCCGCCGCGTTCTCCACCAAATCCTTCTGCAACGAGATTCTCATCCTCTCTTCCATCAACCACCCGAACCTCGTGAAGCTTCACGGATACTGTAGCGACCCGAGGGGGCTTCTTTTAGTCTACGATTACATCCCTAACGGAACCCTAGCGGAACACCTGCATAACCGTAAGGGCTCGCTGACGTGGCAGGTGAGGCTCGACATCGCGTTGCAAACGGCGTTAGCGATGGAGTATCTTCACTTCTCGGTGGTGCCGCCGATTGTGCACAGGGACATAACGTCGTCGAATATTTTCGTGGAGAGGGATATGAGGATTAAGGTTGGGGATTTTGGACTTTCGAGGCTTTTGGTGGTGCAGGATAATAACACCACGTCGTCTTCGAACGGGTTTGTGTGGACCGGGCCGCAAGGGACGCCGGGCTATTTGGACCCAGATTATCACCGGTCCTTCCGGTTAACCGAGAAGAGTGACGTGTACAGTTTTGGAGTGGTGTTGCTGGAGCTTATTTCGGGGCTGAGAGCGGTTGATCAGAATAGGGACAAGCGCGAAATGGCGCTTGCGGATTTGGTTGTTTCGCGGATCCAGATGGGGCAGTTACATCAAGTGCTCGACCCGGTTCTTGACTGCGCCGACGGCGGCGTTGCCGCCGTCGCGGAGCTTGCTTTCCGGTGTGTCGCGGCCGATAAGGACGACAGGCCGGACGCCAGGGAGGTGGTGGAGGAGCTGAAGCGGGTGCGCAACAGAGCCGTTACGGCGGCGAAGGAGTGA | 1848 | 0.5579 | MSPSIFTIILLSFLLFSTPSKSQTPSCSSNLNTSTHTCPPFPSNNPPYPFSSTPGCGHPSFHLTCSTPHSQISINNFSFSILSYNPNTSSITLSPHQQHPNNIFPSIPTHPINLSSTPFRISAATCSRLSFLRPCFPPPPLPNCSHSPFQCHLLKNPSHLLHDCASTHHHSSSDTDQSSACQTDILGFLEELLQTGIQLDWDETRDPYFTNCSSCRSTNNGICGFNFSSPNYPFQCFHFHPESTLSPPWFRKFKPSKIAIFTTIITLTSLILIISVTTAMLRRSKASSATQQDPNTLFLHNHRSASLLPPAFTYEDLALSTNNFDSKRIIGDGGFGSVYLANLRDGRLAAVKYLHRHHAVSAAFSTKSFCNEILILSSINHPNLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHNRKGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDNNTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQNRDKREMALADLVVSRIQMGQLHQVLDPVLDCADGGVAAVAELAFRCVAADKDDRPDAREVVEELKRVRNRAVTAAKE* | 616 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso2g0205 | 615 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 447 | 459 | IPR008266 | GO:0004672|GO:0006468 | |
Gso2g0205 | 615 | ProSiteProfiles | Protein kinase domain profile. | 324 | 605 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso2g0205 | 615 | CDD | STKc_IRAK | 330 | 604 | - | - | |
Gso2g0205 | 615 | SUPERFAMILY | Protein kinase-like (PK-like) | 305 | 602 | IPR011009 | - | |
Gso2g0205 | 615 | Pfam | Protein tyrosine and serine/threonine kinase | 327 | 602 | IPR001245 | GO:0004672|GO:0006468 | |
Gso2g0205 | 615 | Coils | Coil | 595 | 615 | - | - | |
Gso2g0205 | 615 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 27 | 610 | IPR045274 | GO:0007166 | |
Gso2g0205 | 615 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 | 27 | 610 | - | - | |
Gso2g0205 | 615 | ProSitePatterns | Protein kinases ATP-binding region signature. | 330 | 352 | IPR017441 | GO:0005524 | |
Gso2g0205 | 615 | Gene3D | Phosphorylase Kinase; domain 1 | 300 | 403 | - | - | |
Gso2g0205 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 404 | 615 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso2g0205 | Gso-Chr2 | 2147902 | 2150450 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso2g0205 | 6 | 612 | Receptor kinase-like Gene Family | AT1G69910 | 57.953 | 0.0 | 679 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Gso2g0205 | PK_Tyr_Ser-Thr | 6.7e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso2g0205 | - | - | gmx:100816739 | 1166.76 |