Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0169 ATGAAGAATTTCTTGGTTTCTTTGTACTACTTGTTTCCTGCAATCATTGCAATTATTCTTGTGCTGCTCACTCCAATTCCAAGTGCACAGCTAACAACAAGTGAGAACAGAATCCTTCTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGCTCTTCAAGGATGGACCAACTTGACCAATTTTTGCTCTCTCCCTCCTCCCCTCAGCATTGTGTGCTTCAATGGCCATGTAACCGAGTTAACCGTCGTTGGCAATTCATCTTGGACTCTCTCAGAAAGATTCTCCATTGAGTCTTTCTTTACTGTCTTGACAAAGCTCTCAAATATGAAGGTGTTGTCATTGGTGTCACTTGGTTTGTGGGGTCCCTTGCCTTCCAAGATTGACAGGTTCTGGTCCCTTGAAGTGATGAACTTTAGCTCAAACTTCATTTATGGGGAAATTTCACCATCAGTTTCCTCTTTGAAGAATCTAAAAAGTCTTGTTTTGGCTAATAATCTTTTCAATGGGAGTGTGCCTGATCTTGGAAAACTAGCTTCTCTTGAAGAGCTCAATTTGAGTGGCAACAAATTAGGCCCTGAGTTCCCTTCATTGAGCAAGAATCTTGTGAGGGTTATCTTGAGAAACAACTCATTGAGATGTAGAATCCCTCCTCAACTCATTCATGTTTATAAACTTGAGCTGTTTGATATCTCTTCCAATGTGATATTTGGAAATATCCCATCATTTATTTTCTCTCTTCCTTCCCTAAAGTACCTAAACTTGGCTTCAAACCAATTAAGTGGCTACCTTTCTTTGAATGTGTCATGTAGTTCTTCTCTCACATTTGTTGATATCTCACACAACCTCTTGGTGGGAACATTGCCATCTTGTATCGGTTCAAATGCTTCAAACCGAACAACACTTTATTATGGGAATTGTTTGGTAACCAGAAGCTTATTAAGTGACCAATATCCATCTTCTTATTGCCAGAAAGTGGAGTCCTTAGCAGCTGTCAAGCCATCAATTAAAAGCCAGAAGAGGGAACCAGAGATGGAACTAGGCCAAATTATTGGTATTGTTGGAGGTGTTGTGGGAATTGCAGGGCTTATGGTTCTTCTCATTTGGTGCATCTTCAGAAAGTCTAAACTAGAAAAAGCAGACAGTAATTATAGCATAGGCATCTCTGCTCCAAATAATTTTTCCATCCGTGCATATTCAAGACCAAATATTAATGCAAGACGTCCTCCTCTACCAATGAGGCAACCTGTTCTTGGATTCCCACCATACTGCATTTTCTCAATAGAAGAAATTGAAGATGCTACAAACAACTTTGACCCATCAAATCTTATAGCAGAAGGATCACAGGAACAGCTATATAAAGGTTGGCTCATAGATGGTTCAATGGTTATGGTCAATCGCAATAAACTAAAGCAGAAAAGTTTGCACAAAAACAGTATTCAGAGCTTGAAGGTATTACCCTATTTAAGGCACAGGCATTTGGTGAGTGTTCTAGGACACTGTGTCATTACTCATCATGACCATCCCCAAATGATAAGCACAATATTCATTGTATTCGAACATGTCTCAAACGTGTCCTTGAGGGATTACCTTGCAGATAGGAGAAAAAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATCAGCATAGGCATTGCAAGAGGAATCCAGTTCTTACACACTAGAGTTCATCCTGGCATATTTGGCAACAATATAAAGATTGAGAATATTCTGTTGGATGATTGCCTCAATGCAAAAGTTAGCGGATACAGCATTCCATGGCCATCCAAGAAAGGTCATGACAGCAAACTTTATGATCAAAGAGCACTCAATCAAATTGGCAGCATTAATGATGCAGAAAAGGAAGACATCTATCAGTTTGGTGTTATTCTACTTGAAGTTATCACTGGCAAACTAATTACATCTTCCAGTGAAGTAGAGGAGCTGAAGAATGATCTTGAGAGAGGTTTAGCAGAAGCTTCATCACCATCTCTAAAGGGTGCAACACCATCACTAAAGGGTACATCACCGATACTAAAGGGCATGTCTGATTCTTCCCTCCGGGATACTTGTGTGCATGAATCATTGAAGACTACAGTTCAGATCACCATCAGTTGTCTCAGCAAGGTTTCAAGTAACCGCCCTTCAATAGAGGATATTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGCCAAGGACCAGTGGTGTACATTTCTTTACAGATATGTAA 2232 0.4001 MKNFLVSLYYLFPAIIAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALQGWTNLTNFCSLPPPLSIVCFNGHVTELTVVGNSSWTLSERFSIESFFTVLTKLSNMKVLSLVSLGLWGPLPSKIDRFWSLEVMNFSSNFIYGEISPSVSSLKNLKSLVLANNLFNGSVPDLGKLASLEELNLSGNKLGPEFPSLSKNLVRVILRNNSLRCRIPPQLIHVYKLELFDISSNVIFGNIPSFIFSLPSLKYLNLASNQLSGYLSLNVSCSSSLTFVDISHNLLVGTLPSCIGSNASNRTTLYYGNCLVTRSLLSDQYPSSYCQKVESLAAVKPSIKSQKREPEMELGQIIGIVGGVVGIAGLMVLLIWCIFRKSKLEKADSNYSIGISAPNNFSIRAYSRPNINARRPPLPMRQPVLGFPPYCIFSIEEIEDATNNFDPSNLIAEGSQEQLYKGWLIDGSMVMVNRNKLKQKSLHKNSIQSLKVLPYLRHRHLVSVLGHCVITHHDHPQMISTIFIVFEHVSNVSLRDYLADRRKREMLKWPQRMAISIGIARGIQFLHTRVHPGIFGNNIKIENILLDDCLNAKVSGYSIPWPSKKGHDSKLYDQRALNQIGSINDAEKEDIYQFGVILLEVITGKLITSSSEVEELKNDLERGLAEASSPSLKGATPSLKGTSPILKGMSDSSLRDTCVHESLKTTVQITISCLSKVSSNRPSIEDILWNLQYSMQVQEPRTSGVHFFTDM* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0169 743 ProSiteProfiles Leucine-rich repeat profile. 179 201 IPR001611 GO:0005515
Gso2g0169 743 ProSiteProfiles Protein kinase domain profile. 437 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0169 743 PANTHER OS07G0166700 PROTEIN 3 742 IPR045272 GO:0004714|GO:0006468
Gso2g0169 743 Gene3D Transferase(Phosphotransferase) domain 1 521 736 - -
Gso2g0169 743 Pfam Protein tyrosine and serine/threonine kinase 462 655 IPR001245 GO:0004672|GO:0006468
Gso2g0169 743 Gene3D Phosphorylase Kinase; domain 1 414 511 - -
Gso2g0169 743 Gene3D Ribonuclease Inhibitor 32 199 IPR032675 -
Gso2g0169 743 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 742 - -
Gso2g0169 743 SUPERFAMILY L domain-like 39 309 - -
Gso2g0169 743 Gene3D Ribonuclease Inhibitor 200 345 IPR032675 -
Gso2g0169 743 SUPERFAMILY Protein kinase-like (PK-like) 411 723 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0169 Gso-Chr2 1792362 1795833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0169 29 649 Miscellaneous Gene Families AT2G02780 48.916 2.21e-172 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso2g0169 PK_Tyr_Ser-Thr 3.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0169 - - gmx:100808724 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0169 2 1792362 1795833 Gso2g0169 2 1792362 1795833 ECH