Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0168 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGTTCAAGAATTTACTCTTGGGGAAGAAATCGTCTTCAAAGTCTACTTCATCAAAGAAGAATGACATTTTTAAACCTTCAATTGACAAGGATTTGCTGGTGTCGTCTGAGGTACCCGTGCCTGATCCAACCATGGATTCGTTGCAGATATCCACACCAATATCTGGAGCTAATGATTATAAAGGAGTGTTTTCCGAAAAGGAGGTAGTTAGTAGGTCATCACATGATAGGGATGTTCTTTCAACTAGAGTCAAAGAAGCTAAGGTGCAAGATGTTGCTAATTTTGGATCTCAAGAGAATCTTGAGAAACTCCAGCTTACGGAAGCAACTATAAAAGTTCAGGCTGCTTGTAGAAGTTATCTGGCTCGTCGAACATTGCAAAAACTCAAAGGTGTCATACAACTGCAAGCTTTTATTCGTGGCCACTTGGTTAGAAGACACGCTGTTTCTGCATTATATTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGTTACAATGTTAGATGCTCTGATATTGGGCTTGCAGTCCAGAAAATTCGTAAGGATACTCATTGCTCAAATTCTGTTCGGGTAGTTTCGTCCACACAGGCAGAGAAGTTGTCTGAAAATGTCTTTGTTTGCAAGCTTCTGGCTTCATCCCCATATGCAGTTCCTCTATCACTCAACAGTGATCCTGGAGAACCTAACATGGGTCAGAAGTGGCTTGACTATTGGACAAGGTCCCACTTTTGGGCATCTCTTCCTGAATTTAAAAAGAAACTTGAGTCAGTGTCTGATGAGAAAAATGGCACTTCTCAGACAGTTCAAAAGGGGCAAGTTAAAAAAATTACTCGGAAATCTCCTACTGTGAAAGCTGACAATGTCTCAAATTTAGGTTCTAACAAATCTAAACAGCATCTGAAAAAGGATTCAAGCCACCCATTGCCTTCAGCTCAGGAAAACCCACCAAAAGAAACTGAGAAAAGTAGTTTTGGAAAGACTCATGCGCATAATGCTTCAAATGGATCTGAGGTTGTTAATGAAAAAAGAAAATCCGGCAATAAAAAGATTTTGGATCATGCTGTCATTGATGTTTCAGAGCAGGGCCCAAATGCCTCTTCAGCGAAAGAGAAAGATTCGACTGTGCCAAAGTCAAAAGAGTCTGATCCTGAGAAAGGTCATGGACAGCAAACAAAAGACAAGAATGATAATGAGCCACATAATGATCCCATTGCTGTCTCAAAGACAAGTGTGAAGAAGGGTGGAAATGAAGGAATTCAAGTAGTCAGTGAGAATTTGAATGGTGGTGACAATTGTATCAGTAACAATAGCCAAAGAAGAGCTTCACTACCTGCTAACATTAATGAACAAGAGAATGAGTTATATAACACTCCTGTTACTCCAAGACTGCCCAGTTACATGGCTCCTACTGAATCTGCAAAAGCTAGGCTAAGAGGACAAGGCTCTCCAAGATTTACTACTGATTTGGTAGACAAAAACAGTGCAACCAGGCGGCATTCACTTTCATCCTCACTTAATGGCAAGTCAGGTTCATTTTCCCCGAGAGCTGAAAAGCTGATAGGCGTAAGCAGTAGAGGAGGGATAAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGGACTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1692 0.4125 MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDIFKPSIDKDLLVSSEVPVPDPTMDSLQISTPISGANDYKGVFSEKEVVSRSSHDRDVLSTRVKEAKVQDVANFGSQENLEKLQLTEATIKVQAACRSYLARRTLQKLKGVIQLQAFIRGHLVRRHAVSALYCVKGIVKFQALARGYNVRCSDIGLAVQKIRKDTHCSNSVRVVSSTQAEKLSENVFVCKLLASSPYAVPLSLNSDPGEPNMGQKWLDYWTRSHFWASLPEFKKKLESVSDEKNGTSQTVQKGQVKKITRKSPTVKADNVSNLGSNKSKQHLKKDSSHPLPSAQENPPKETEKSSFGKTHAHNASNGSEVVNEKRKSGNKKILDHAVIDVSEQGPNASSAKEKDSTVPKSKESDPEKGHGQQTKDKNDNEPHNDPIAVSKTSVKKGGNEGIQVVSENLNGGDNCISNNSQRRASLPANINEQENELYNTPVTPRLPSYMAPTESAKARLRGQGSPRFTTDLVDKNSATRRHSLSSSLNGKSGSFSPRAEKLIGVSSRGGIRSDRSLSSSRDGTEKLIQPQWRR* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0168 563 PANTHER IQ-DOMAIN 5-RELATED 1 560 - -
Gso2g0168 563 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 560 - -
Gso2g0168 563 MobiDBLite consensus disorder prediction 338 352 - -
Gso2g0168 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 180 IPR027417 -
Gso2g0168 563 MobiDBLite consensus disorder prediction 540 555 - -
Gso2g0168 563 MobiDBLite consensus disorder prediction 272 307 - -
Gso2g0168 563 SMART iq_5 137 158 IPR000048 GO:0005515
Gso2g0168 563 SMART iq_5 114 136 IPR000048 GO:0005515
Gso2g0168 563 MobiDBLite consensus disorder prediction 487 563 - -
Gso2g0168 563 ProSiteProfiles IQ motif profile. 137 166 IPR000048 GO:0005515
Gso2g0168 563 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Gso2g0168 563 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Gso2g0168 563 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Gso2g0168 563 Gene3D - 113 162 - -
Gso2g0168 563 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Gso2g0168 563 MobiDBLite consensus disorder prediction 384 413 - -
Gso2g0168 563 MobiDBLite consensus disorder prediction 353 367 - -
Gso2g0168 563 Pfam Protein of unknown function (DUF4005) 462 542 IPR025064 -
Gso2g0168 563 MobiDBLite consensus disorder prediction 498 523 - -
Gso2g0168 563 MobiDBLite consensus disorder prediction 268 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0168 Gso-Chr2 1782065 1789084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0168 4 563 IQD Protein Family AT1G14380 32.911 2.16e-78 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0168 - - gmx:100808200 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0168 2 1782065 1789084 Gso2g0168 2 1782065 1789084 ECH
Gso2g0168 2 1782065 1789084 Gso6g1608 6 16851386 16858013 ECH