Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0144 ATGGAAAGCAAAACAAACTACTTGCCGGTCTTGGCCATATGCATGTGCTTGATTATAGCGCACGGTGCGGCGGAAGAAAAAATAGGCAAGGAGCTAATAAAGAGCATATGCAAAAACAGGGGAAACGATGAATTGTGCATGCAGGTGCTTTCCTCGGACCCAGATAGTGATCATGCGGACCTACAGGAGCTGGCATTGATATCGCTGAAGGCGGCGGCATCAAACGCGAGCGGCATACTAAATGATTGTAAGAGAATGATCGACAACCAAGATTTGGAACCTAAGATTCAACAGGGGTTGGCTGATTGCAAAGAGAATCTGTTGGACGCAGAGGGCCAAATTCAGGATGCTGTTGCGTCCATATTGAACAATGACAAGCTTGATGCTCAGGTATGGCTCAAGGCTGCATTGGCTGCGATTGATACATGTGACGATTCTATCCCCGGGGACGATGATGTTCTGTCTAGAAAGAGTGTGTCGTTTCGCCAATTGTGCAACATTGCCGTCGCCATCAACAAGGCCATGTTGGCCGCTCGTACCTAA 543 0.4807 MESKTNYLPVLAICMCLIIAHGAAEEKIGKELIKSICKNRGNDELCMQVLSSDPDSDHADLQELALISLKAAASNASGILNDCKRMIDNQDLEPKIQQGLADCKENLLDAEGQIQDAVASILNNDKLDAQVWLKAALAAIDTCDDSIPGDDDVLSRKSVSFRQLCNIAVAINKAMLAART* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0144 180 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 175 IPR006501 GO:0004857
Gso2g0144 180 PANTHER PECTINESTERASE 1 174 - -
Gso2g0144 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 173 IPR035513 -
Gso2g0144 180 CDD PMEI-like_1 32 175 - -
Gso2g0144 180 Pfam Plant invertase/pectin methylesterase inhibitor 32 171 IPR006501 GO:0004857
Gso2g0144 180 SMART PMEI_2 28 171 IPR006501 GO:0004857
Gso2g0144 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 176 IPR035513 -
Gso2g0144 180 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0144 Gso-Chr2 1479850 1480800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0144 33 147 Carbohydrate Esterase AT1G53840 25.806 6.12e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0144 - - gmx:100803408 355.14