Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0133 ATGGCGGCATTGTCGTTCTCAGTGGCATCCGTGGTGGAAGATGTGCTTCAACAACACGGTACTCGCCTCAAAGATCTTGACTTGGAATCTAGAAAAGCAGAAGAAGCTGCATTCAGAAGATATGAAGCAGCAGGGTGGCTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTGCCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTCTGTAATGTTCTTAATAAAGTTCAACCTGGTGCTGTACCCAGGGTTGTGGAGAGTCCTATTGATTCTGCACTAGTCCCCGATGGAGCACCCTTATCCGCATTTCAGTATTTTGAAAATGTGAGGAACTTTCTGCTGGCTGTGCAGGAAATTGGAGTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCAGCCAGGATTGTGAACAGCGTCTTAGCTCTTAAGTCCTATAGTGAATGGAAACAGACTGGGGGTAATGGTGTGTGGAAATTTGGAGGAACTATCAAACCCACTGTCTCTTCAAAATCTTTTGTGAGAAAAAACTCTGAGCCATTTACTAATTCCCTGTCAAGGAACTCGTCCATCAATGAAAAATCCATGACTGCTCTTACCTCTGATGTCGAGTCTAATAAAATGTCTGGGTCTCACTCTTTGAGTATGCTTGTTCGTGCAGTACTATTAGATAAGAAGCCTGAAGAAGTTCCATTGTTAGTTGAATCAGTCTTGAATAAGGTCGTAGAGGAGTTTGAGCATCGCATTGCCAGCCAGGGTGAACAGACAAAAATTTCAAGAGGTGCTGTGTTGCTAGGCAATGGATCTGTATCAAAGTTTGTTATGGCAGATAAAAAGATGGATAACAAGATTCCTATGGTAACAAAGAAAGAAAGATTGCTCCATAAAAACTTTGTCGATGATGAGGAATCGAAAAGACAACTTCTGAAGAAGCAAATGCTCTTTGATCAACAGCAAAGAGATATTCAAGAACTAAAGCATACAATTCACACCACCAAAGCTGGTATGCAGTTCCTGCAAATGAAGTTTCATGAGGAGTTCTCCAATCTAGGCAGGCATGTTCATGGCTTAGCTCATGCTGCTTCTGGATATAATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTTCAGGATCTTAAGGGAAGTATAAGGGTGTATTGTCGAGTAAGACCCTTCTTATCTGCACAAGCAAATTATTCAAGCACAGTGAATAATATAGAAGATGGAACTATCACAATTAATATTCCTTCAAAGAACGGGAAAGGTCACAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCAGCATCCCAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGTTTCAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTCACACTATGACTGGACCAAAAGAGATCACCGAGAAAAGCAGAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAGAGACACTTTTTGCTATGACGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGATCAAACAAAAGATTAGAAATTCGTAGTAATTCTCAGAGAGGGCTCAGCGTACCAGATGCATGCCTAGTCCCAGTTTCATCAACAAAAGATGTTATTGAACTAATGAACCTGGGCCAAAGGAATCGTGCAGTCGGAGCAACGGCACTTAATGATCGTAGTAGTCGATCACACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAACTATTCTACGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGAGTTGACAAATCTGAGGCCACAGGAGATAGGCTGAAAGAAGCACAGCACATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAACTCACACAGTTACTCCAGGATTCACTCGGAGGACAGGCCAAGACACTAATGTTTGTTCACATAAGTCCAGAGGTTGATGCTGTTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCCACAGTTGAACTTGGTGCTGCTCGAGTGAACAAGGATGGGGCAGATGTCAAAGAGCTCAAAGAACAGATAGCCTGCCTCAAGGCAGCATTGGCAAGAAAGGAAGGTGAATCAGAACATTCTTTATCAGGCAGCTCTGAAAAATATAGGACAATGGCTAGTGAGCTATCACCTTATCATGCAAACCAACAGGGTGCTGATATTGTGAGCCCAGGGTGCCGGCAACCAATGCTTGATGTAGGCAATATAGAGCTTCACAGTAGTACCACATTGAGACAAAAAACTCAGAGCTATGATTTTGATGAGATGTCAACGAATTCACCGCCCTGGCCCCCGGTGAATAATCCTAGACAACTCTATGGGGATGATGACAGAGAAACTGGCTCAGGAGAGTGGGTAGATAAAGTCATGGTAAACAAGCAAGATGCTAATAAAACTGAGAACATCTTAGGGTGTTGGGAAGCAGACAGTGGGAACTTATCCGATGTCTTTTATCAAAAATATCTCCAAGGTTCTTCCAAAATGTTCTCAGAACGATCCTACAACATGTTCATGGGAGGCAACAACCAGTTTAACGTTGCTGGTTCAGATGACATGGATGATCTTGATGATACAACCACTGATTCCTCGGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTTACCAGCATAGCCAATGGCAACGGATCAAAGGCTAGGAGACCTGTCTCAAAGCCCACAAATAGCCCAGTATTGAGCAAGAATAATGTTCATTCTTCTCTTGGTCCTTCACCTTCAAGGAAACAATCAAACAGTGTCTCACATCGAACAGCAAGACATCCAGCTCCAGTTGACATGAAACGTAAAACTGGGAGTAGAAAGTAA 3021 0.4224 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPRVVESPIDSALVPDGAPLSAFQYFENVRNFLLAVQEIGVPTFEASDLEQGGKSARIVNSVLALKSYSEWKQTGGNGVWKFGGTIKPTVSSKSFVRKNSEPFTNSLSRNSSINEKSMTALTSDVESNKMSGSHSLSMLVRAVLLDKKPEEVPLLVESVLNKVVEEFEHRIASQGEQTKISRGAVLLGNGSVSKFVMADKKMDNKIPMVTKKERLLHKNFVDDEESKRQLLKKQMLFDQQQRDIQELKHTIHTTKAGMQFLQMKFHEEFSNLGRHVHGLAHAASGYNRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSAQANYSSTVNNIEDGTITINIPSKNGKGHRSFNFNKVFGPSASQAEVFSDMQPLIRSVLDGFNVCIFAYGQTGSGKTHTMTGPKEITEKSRGVNYRALSDLFLTADQRRDTFCYDVSVQMIEIYNEQVRDLLVTDGSNKRLEIRSNSQRGLSVPDACLVPVSSTKDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEVDAVGETISTLKFAERVATVELGAARVNKDGADVKELKEQIACLKAALARKEGESEHSLSGSSEKYRTMASELSPYHANQQGADIVSPGCRQPMLDVGNIELHSSTTLRQKTQSYDFDEMSTNSPPWPPVNNPRQLYGDDDRETGSGEWVDKVMVNKQDANKTENILGCWEADSGNLSDVFYQKYLQGSSKMFSERSYNMFMGGNNQFNVAGSDDMDDLDDTTTDSSEPDLLWQFNHSKLTSIANGNGSKARRPVSKPTNSPVLSKNNVHSSLGPSPSRKQSNSVSHRTARHPAPVDMKRKTGSRK* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0133 1006 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1003 - -
Gso2g0133 1006 Pfam Kinesin motor domain 401 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g0133 1006 SMART kinesin_4 393 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g0133 1006 Gene3D - 24 187 IPR036872 -
Gso2g0133 1006 PRINTS Kinesin heavy chain signature 468 489 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g0133 1006 PRINTS Kinesin heavy chain signature 590 607 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g0133 1006 PRINTS Kinesin heavy chain signature 621 639 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g0133 1006 PRINTS Kinesin heavy chain signature 670 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g0133 1006 Coils Coil 16 36 - -
Gso2g0133 1006 MobiDBLite consensus disorder prediction 943 989 - -
Gso2g0133 1006 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Gso2g0133 1006 MobiDBLite consensus disorder prediction 943 1006 - -
Gso2g0133 1006 CDD KISc_C_terminal 393 722 - -
Gso2g0133 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 752 IPR027417 -
Gso2g0133 1006 Gene3D Kinesin motor domain 390 761 IPR036961 -
Gso2g0133 1006 MobiDBLite consensus disorder prediction 992 1006 - -
Gso2g0133 1006 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
Gso2g0133 1006 SMART ch_5 39 157 IPR001715 GO:0005515
Gso2g0133 1006 Coils Coil 734 754 - -
Gso2g0133 1006 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1003 - -
Gso2g0133 1006 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Gso2g0133 1006 ProSiteProfiles Kinesin motor domain profile. 395 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0133 Gso-Chr2 1374820 1381577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0133 383 720 Calmodulin-binding Proteins AT5G65930 42.815 1.09e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0133 K10406 - gmx:100801279 1948.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0133 2 1374820 1381577 Gso10g0586 10 6805603 6809484 GST
Gso19g1797 19 46702251 46710124 Gso2g0133 2 1374820 1381577 PCT
Gso3g1830 3 43932788 43938804 Gso2g0133 2 1374820 1381577 PCT
Gso2g0133 2 1374820 1381577 Gso19g1797 19 46702251 46710124 PCT
Gso2g0133 2 1374820 1381577 Gso3g1830 3 43932788 43938804 PCT