Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0110 ATGGCTTCGATTCAACGCCCGGCGAGTTCGGGATCGTCGGAGGGAGGAGATCCGGTGATGTACGAGAGGAAGAGGAAGCGTATGGAGTCGAACCGCGAGTCCGCCCGGCGATCGCGGATGAAGAAGCAGAAGCAGCTCGAAGACCTAACCGACGAAGTGAGCCGATTGGAAGGCGAGAACGCGCGTTTGGCGCCGAGCATAAAAGTGAAGGAGGAAGCGTACGTTGAGATGGAGGCCGCCAACGACATCCTCAGAGCACAGACCATGGAACTCGCCGACCGGTTAAGGTTTCTGAACTCCATTATTGAGATCGCCGATGAGGTCGGCGGCGAATCCTTCGAGATTCCGCAGATTCCGGACCCTCTCTTCATGCCCTGGCAGATCCCCCACCCTATGATGGCAACGCCGCCTGACATGTTCTTCCATGGAAATGAAGGCCTGTTTGCTTGA 450 0.5711 MASIQRPASSGSSEGGDPVMYERKRKRMESNRESARRSRMKKQKQLEDLTDEVSRLEGENARLAPSIKVKEEAYVEMEAANDILRAQTMELADRLRFLNSIIEIADEVGGESFEIPQIPDPLFMPWQIPHPMMATPPDMFFHGNEGLFA* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0110 149 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Gso2g0110 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 134 - -
Gso2g0110 149 MobiDBLite consensus disorder prediction 1 52 - -
Gso2g0110 149 CDD bZIP_plant_GBF1 24 74 IPR045314 GO:0003700|GO:0006355
Gso2g0110 149 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 134 - -
Gso2g0110 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Gso2g0110 149 Coils Coil 67 87 - -
Gso2g0110 149 Coils Coil 25 59 - -
Gso2g0110 149 MobiDBLite consensus disorder prediction 18 52 - -
Gso2g0110 149 Pfam bZIP transcription factor 23 78 IPR004827 GO:0003700|GO:0006355
Gso2g0110 149 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Gso2g0110 149 Gene3D - 22 72 - -
Gso2g0110 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 63 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0110 Gso-Chr2 1130396 1131606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0110 1 140 bZIP Transcription Factor Family AT3G62420 49.315 1.71e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso2g0110 bZIP_1 1.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0110 K25786 - gmx:778189 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0110 2 1130396 1131606 Gso2g0110 2 1130396 1131606 ECH
Gso2g0110 2 1130396 1131606 Gso10g0116 10 1226536 1227684 GST
Gso19g1819 19 46932277 46933490 Gso2g0110 2 1130396 1131606 PCT
Gso3g1854 3 44149446 44150597 Gso2g0110 2 1130396 1131606 PCT
Gso2g0110 2 1130396 1131606 Gso19g1819 19 46932277 46933490 PCT
Gso2g0110 2 1130396 1131606 Gso3g1854 3 44149446 44150597 PCT