Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0105 ATGGTGTCCAAACCTACCGACTCGGCTTCCAAACCTCGAAAACAACTTGGAGAGCCAGCAAATGATGGTATTGGAAGCTTGTCCCTCGAGTTAAATCAGTTAAAAAAGCAAATCCAGGCGGAGAGAATTGTGTGCATTAAAGAAAAAATTCGGAGCAATGAGAAGAAGCTACAGTGTCATATGTCAGGAGTCCTGTCAGAAACATCAACAAGGGGTTCTTCACAGACAGAGGAAAATAGGAAAAATCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTGGGGAGACAAGGACCACAACAATCAAGATGTATTATCTGCTACAAGTATCAAAATGCCTTATATTGAAACACTACCACCATATACCTCTTGGATATTTCTGGACAGAAATCAGAGGATGGCGGAAGATCAGTCAGTGGTTGGAAGAAGACGCATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGCGACAGTGAGGAGGAGTTAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGATCGTGTCATATGGATGGCATTTGAGGAATATGGGTTAAACAAGGAGGTACCAAATATTGTTAGTGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGAAGGTTGGACCAGCCTTCTCAAAACTCAGGAGAATATGAATCTACTATTGGCATATGTCTAGAGAAAAGCCTGAGTGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCATAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGAGACAGGAAACCTTGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGATATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAATACCTTTTCAAACAGAAGTTGATTGTCATGGATCTCTCAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAACGGAAAGTCCTAAATCAGTCAGACATGTCACCCCGTGACTCAACACTCCATCCCAATGATTGTCAGAATTCTTATAAAAAGCTGAAGGCAATCTCTGATGCTGTAGTTACTGTAAATAGTGATTCTAGCAAGAAAATAAGTTTGGGTGCATGTGGTGAAAGTATACATACAATTACTAGTGCAATTTTGGACAAATCTGTTAAAGATAACTCAATTAAATTAATAGATTCTTCTAGCACTTGCCCTAGTGATGAGCAGGACAAAAGTATTGGTGATGGACCAAAAGATCCTACAAATGAGACAGAATTTAAGATGTCCAATTCAATGGAGGGGATAGTTGATGGGATGCTAAGTCTCTCAGATTGGAAACCTCTGGAGAAAGAACTATACTTAAAGGGAGTAGAACTGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTCCTGGTCTGAAGACTTGTATGGAAATAGCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCACGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGAAAAGGGAAAATTTGATGCTGACTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTATTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCAAAAAGCTGCAAAAATCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGTTTTGCTGCAGGACGGGAATGTGATCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCGTTAGGGGAGCCACCTCGGCGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTGAGACAACAACAAAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCGGTTAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATACGATCGCGCCAACTCATCTTTTCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTATCGTTATGGTCCCGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCTAAGAGAGACGAATCAACAGCTCCTCAAGGCAGGGCTAAGAAACACCAGTCTCATTGA 2610 0.4161 MVSKPTDSASKPRKQLGEPANDGIGSLSLELNQLKKQIQAERIVCIKEKIRSNEKKLQCHMSGVLSETSTRGSSQTEENRKNPILSSRIDHPLCKFSGFSPVWGDKDHNNQDVLSATSIKMPYIETLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEEKHEFSEAEDRVIWMAFEEYGLNKEVPNIVSEFVGGTSLEIQERYKTIKEKNIGRLDQPSQNSGEYESTIGICLEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYHSEKQTVWSDPEGDRKPCSDQCYLQQLKVVKNVTEDSTSGSDQNKRTTITEEADVILAPSIIEEPSNQSIIPFQTEVDCHGSLNLNVPISVSVEKRKVLNQSDMSPRDSTLHPNDCQNSYKKLKAISDAVVTVNSDSSKKISLGACGESIHTITSAILDKSVKDNSIKLIDSSSTCPSDEQDKSIGDGPKDPTNETEFKMSNSMEGIVDGMLSLSDWKPLEKELYLKGVELFGRNSCLIARNLLPGLKTCMEIASYMHSGGVSMPHGSIVAPSSIMEEKGKFDADCTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCINGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESTAPQGRAKKHQSH* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0105 869 SMART sant 500 550 IPR001005 -
Gso2g0105 869 SMART sant 179 229 IPR001005 -
Gso2g0105 869 ProSiteProfiles CXC domain profile. 607 706 IPR026489 -
Gso2g0105 869 SUPERFAMILY SET domain 621 838 IPR046341 -
Gso2g0105 869 Pfam CXC domain 659 690 IPR041355 -
Gso2g0105 869 SMART CXC_2 655 692 IPR033467 -
Gso2g0105 869 ProSiteProfiles SET domain profile. 720 835 IPR001214 GO:0005515
Gso2g0105 869 MobiDBLite consensus disorder prediction 1 23 - -
Gso2g0105 869 MobiDBLite consensus disorder prediction 840 869 - -
Gso2g0105 869 Gene3D SET domain 621 837 IPR046341 -
Gso2g0105 869 MobiDBLite consensus disorder prediction 61 81 - -
Gso2g0105 869 MobiDBLite consensus disorder prediction 846 862 - -
Gso2g0105 869 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 869 IPR025778 GO:0031519
Gso2g0105 869 CDD SET_EZH 720 836 - -
Gso2g0105 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 15 867 IPR045318 GO:0006338|GO:0018024
Gso2g0105 869 MobiDBLite consensus disorder prediction 458 483 - -
Gso2g0105 869 MobiDBLite consensus disorder prediction 62 81 - -
Gso2g0105 869 Pfam SET domain 731 834 IPR001214 GO:0005515
Gso2g0105 869 SMART set_7 720 841 IPR001214 GO:0005515
Gso2g0105 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 15 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0105 Gso-Chr2 1099460 1108776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0105 709 838 C2H2 Transcription Factor Family AT2G23740 26.531 3.10e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso2g0105 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0105 - - gmx:100795451 1778.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0105 2 1099460 1108776 Gso2g0105 2 1099460 1108776 ECH
Gso2g0105 2 1099460 1108776 Gso10g0112 10 1190709 1200722 GST
Gso19g1823 19 46958383 46965076 Gso2g0105 2 1099460 1108776 PCT
Gso3g1859 3 44175306 44182973 Gso2g0105 2 1099460 1108776 PCT
Gso2g0105 2 1099460 1108776 Gso19g1823 19 46958383 46965076 PCT
Gso2g0105 2 1099460 1108776 Gso3g1859 3 44175306 44182973 PCT