Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0096 ATGGAGAAGAAGGAGATGGCTGTGAAAACTGAGGATGCGATTGGGTCCTCTTCTTTCCCTTGTTATAATTCAAACCTTTATCCATTCTCGAACGCGTTTGATTTCTCTGAGGTGGACAAAAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTATAGTCCTCTGCCTGAGTTACCACAGCTTTCAACTGTGTCCGTGCAACCTCATCACTCTACAGTTAAGGTTCCGTCTGATAACGGGAAAGAGTGTTCTGAGGTGTTGAATCACCAACCTGCCACTCCAAACTCTTCTTCCATTTCATCCGCGTCCAGTGATGCAGTCAATGATGAACAGAATAAGACTCTTCTAGACCAAGCAGAAGAAGATGATGATGAAGAAGAAGGACAACAAAAGACTAAGAAACAGTTGAAGCCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCATTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGTGTGGAGCGATCTTTCACTGATCCAAGCGTTGTAGTGACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGTTCAGGTGTCTCCGCTGGATACGCCAACAACTTCGGTTCAGTTTTGCCACCGGGAAACTACTTATCCCAGTATCAGCACTACCACCACCAACAACAACAACAGCATCTTGTCAACACATTGTCCTCTTTGGGTTTTCCTTACAATGATTCTTCATCTCCAAAGAACGCTGTTTTTACTCAAGAGAGACGGCTTTGCAGTAATCACGGGACGAATGCGTTTCTGAGGGACCATGGGCTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 963 0.4517 MEKKEMAVKTEDAIGSSSFPCYNSNLYPFSNAFDFSEVDKSSLGFMELLGVQDYSPLPELPQLSTVSVQPHHSTVKVPSDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQNKTLLDQAEEDDDEEEGQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVSAGYANNFGSVLPPGNYLSQYQHYHHQQQQQHLVNTLSSLGFPYNDSSSPKNAVFTQERRLCSNHGTNAFLRDHGLLQDVVPSHMLKEE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0096 320 PIRSF WRKY_txn_fact_IIc 1 320 IPR017396 GO:0003700
Gso2g0096 320 Pfam WRKY DNA -binding domain 165 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0096 320 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0096 320 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0096 320 Gene3D WRKY domain 149 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0096 320 MobiDBLite consensus disorder prediction 56 153 - -
Gso2g0096 320 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 312 IPR044810 GO:0003700
Gso2g0096 320 SUPERFAMILY WRKY DNA-binding domain 156 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0096 320 MobiDBLite consensus disorder prediction 58 115 - -
Gso2g0096 320 PANTHER WRKY TRANSCRIPTION FACTOR 1 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0096 Gso-Chr2 1022578 1024754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0096 34 320 WRKY Transcription Factor Family AT2G47260 47.962 3.22e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g0096 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0096 - - gmx:100784158 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0096 2 1022578 1024754 Gso2g0096 2 1022578 1024754 ECH
Gso2g0096 2 1022578 1024754 Gso10g0100 10 1078969 1081104 GST
Gso19g1833 19 47059017 47060822 Gso2g0096 2 1022578 1024754 PCT
Gso3g1870 3 44271426 44273346 Gso2g0096 2 1022578 1024754 PCT
Gso2g0096 2 1022578 1024754 Gso19g1833 19 47059017 47060822 PCT
Gso2g0096 2 1022578 1024754 Gso3g1870 3 44271426 44273346 PCT