Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0080 ATGGTAGCTGAAGCAGAGGTTGCGTGTCAACAAAACGTGGGTGTGTTGGATGTGAAGCATTTTCCAAATAAGGGAAGCGATGTTCACCAGATCGGAGACGCAGATGCTAATTCGCCTCCGTGTTTTGACCGAGTTCGTGCCACTGAGTCGGTCTCCGCCGAGTTACTCACTTCACAAGAAGATGTTAAGTCTGCAGACAGGATCTCAGATGCTGCTCTTGAATCTGCGGTTCTGCAGTCTATCCCTTGCATCCGTTCTGGTAGTTTTGCTGACATTGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCGTCTCATCTGGGATCACTATACAACTTTCCCCAACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATAAGGAAAAACGTGACAAAGTTCTTCTTTGAGGATGTCAATTTCCCACGGACATCAGAAGTTGATAACGTATTTTTGGAAGAGGTAGAGGATTCCCTCAGAAAGACATTTCTTTTGGCTGATTCAGCTTTGGCCGATGATTGCAGTGTGAATAGTTCATCAGGCACCACGGCCCTTACTGCTTTGATATTTGGAAAGCTTCTAATGGTGGCCAATGCTGGCGACTGCAGAGCAGTTCTCTGTCGCAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCTATTTATCCATCAGAGAGGAGGCGAGTTGAAGAATTGGGTGGCTACATAGAAGATGGTTATCTCAATGGGGTTTTATCAGTTACTCGAGCACTGGGGGACTGGGACATGAAGTTACCTAAGGGTGCTCCCTCACCTTTGATTGCAGAGCCGGAGTTCCGGCAAGTGGCTCTAACAGATGATGATGAATTCCTCATCATAGGATGCGACGGCATCTGGGATGTGATGTCAAGTCAGCATGCTGTTAGCCTTGTTCGCAAAGGCCTGAGGCGGCATGATGACCCAGAGAAATGTGCCAGGGACCTGGTTATGGAAGCATTACGCCTGAACACATTCGACAATCTCACGGTGATCATTGTATGTTTCTCTTCCCTTGACCACGTGGAGCCAGAGCCATCCCCTCCTCGCCAACGGAAGTTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGCTTGTTGGAAGGCAGTGCTAGCAACTGA 1191 0.4819 MVAEAEVACQQNVGVLDVKHFPNKGSDVHQIGDADANSPPCFDRVRATESVSAELLTSQEDVKSADRISDAALESAVLQSIPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPQPSAFYGVFDGHGGPEAAAYIRKNVTKFFFEDVNFPRTSEVDNVFLEEVEDSLRKTFLLADSALADDCSVNSSSGTTALTALIFGKLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVALTDDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHVEPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0080 396 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Gso2g0080 396 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 378 - -
Gso2g0080 396 Gene3D - 69 360 IPR036457 -
Gso2g0080 396 CDD PP2Cc 84 355 IPR001932 -
Gso2g0080 396 PANTHER PROTEIN PHOSPHATASE 2C 1 378 IPR015655 GO:0004722|GO:0006470
Gso2g0080 396 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Gso2g0080 396 SUPERFAMILY PP2C-like 80 357 IPR036457 -
Gso2g0080 396 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Gso2g0080 396 SMART PP2C_4 74 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0080 Gso-Chr2 888428 891138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0080 98 392 PP2C-type Phosphatase Gene Family AT3G62260 69.595 1.89e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0080 K14803 - gmx:100785388 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0080 2 888428 891138 Gso2g0080 2 888428 891138 ECH
Gso2g0080 2 888428 891138 Gso10g0087 10 928253 930973 GST