Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0078 ATGAACACAAGCATGCATGATGGGCCAGAAGAAGAGTTCAAAAGCAGATTGCTTCAACCACCATCAAATGCTGCAGGATACAGCCACACACACGTTTTGGTTTCGAAAGTGGATTTCTACAAAACTACGTGTCCATCTGCGGAGGCAATAGTGAGAAGAGCTGTAAACAAAGCTGTTTCTCTCAACCCGGGCATCGCTGCTGGTTTGATCAGAATGCACTTTCATGATTGTTTTGTCAGGGGTTGTGATGGTTCTGTACTATTAGAATCCACAGCGGGTAACCCATCAGAGAGAGAGCACCCTGCCAACAACCCAAGCTTACGTGGCTTCGAAGTGATCGATGAGGCCAAGGCCCAAATAGAGGCAGAGTGTCCTCACACTGTGTCCTGTTCTGACATTCTTGCTTTTGCTGCTAGAGACAGCACCAACAGAGTCGGAGGCATAAACTATGTAGTACCAGCTGGACGCAGAGATGGTCGTGTCTCTATCAGAGACGAAGCGTCACAACTGCCTCGTCCAACATTCAACACACAACAACTCATTAGTAGCTTTGAACAAAAAGGGTTGTCTGCAGATGAAATGGTGACACTGTCTGGAGCACATTCTATTGGTGTCTCGCACTGTTCCTCCTTCTCCGACCGCTTGTACTCTTTCAATGCCACGTTTCCTCAAGACCCTTCTATGGATCCCAAGTTTGCTACGTCGTTGAAAACCAAGTGTCTGCCTCGGAGTGATAACACAGTGGTGCTTGATGCTTCCACGCCTAACCGTTTGGACAACAACTACTACGCACTGCTAAAGAACCAGCGTGGTTTGTTGACCTCAGATCAGACGTTGTTGACCAGCCCCTCAACGAGACCAATGGTTCTAACCAATGCTAAACATGGTTCAAAATGGGCACGTAAGTTTGCTAAGGCAATGGTGCATATGGGTTCCATCCAAGTGCTAACTGGCTCACAAGGCGAGATCAGGACCCGCTGTAGCGTCGTTAATTAA 996 0.4779 MNTSMHDGPEEEFKSRLLQPPSNAAGYSHTHVLVSKVDFYKTTCPSAEAIVRRAVNKAVSLNPGIAAGLIRMHFHDCFVRGCDGSVLLESTAGNPSEREHPANNPSLRGFEVIDEAKAQIEAECPHTVSCSDILAFAARDSTNRVGGINYVVPAGRRDGRVSIRDEASQLPRPTFNTQQLISSFEQKGLSADEMVTLSGAHSIGVSHCSSFSDRLYSFNATFPQDPSMDPKFATSLKTKCLPRSDNTVVLDASTPNRLDNNYYALLKNQRGLLTSDQTLLTSPSTRPMVLTNAKHGSKWARKFAKAMVHMGSIQVLTGSQGEIRTRCSVVN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0078 331 CDD secretory_peroxidase 36 330 IPR033905 GO:0004601|GO:0042744
Gso2g0078 331 Gene3D Peroxidase, domain 2 171 310 - -
Gso2g0078 331 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PANTHER PEROXIDASE 35 329 - -
Gso2g0078 331 Pfam Peroxidase 51 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 ProSiteProfiles Plant heme peroxidase family profile. 36 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Gso2g0078 331 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 Gene3D - 38 331 - -
Gso2g0078 331 PANTHER PEROXIDASE 25-RELATED 35 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0078 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Gso2g0078 331 SUPERFAMILY Heme-dependent peroxidases 37 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0078 Gso-Chr2 881097 882993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0078 36 329 Peroxidase AT3G21770 48.000 1.83e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0078 K00430 - gmx:100790188 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0078 2 881097 882993 Gso2g0078 2 881097 882993 ECH
Gso2g0078 2 881097 882993 Gso10g0083 10 911780 913169 GST