Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0075 ATGAGTTGTTTCAGCTGTTGCGAAGAGGATGACCTCCATAAGGCTGCTGAAAGTGGAGGACCCTATGTTGTAAAAAATCCAGCAGGGAATGATGGAAATTATCATGCTTCTCAAACTGCAAAGCAGGGCACTCAGCCTGTTAAACCTCAGCCCATTGAAGTTCCTAATATATCAGCAGATGAACTGAAAGAAGTTACGGATAACTTTGGTCAAGATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAGGCTGCAGCAATCAAGAATTTGGATGCCAGTAAACAGCCTGATGAGGAATTTTTAGCCCAGGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAGTTGCTTGGATATTGCATTGATGGAAGCTCCCGTATTCTTGCTTATCAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACACGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCAGTTTTGACATGGGCACAAAGAGTAAAAATTGCTGTAGGGGCTGCAAGAGGACTTGAATACTTGCATGAGAAGGCTGATCCACATATTATTCACCGGGACATCAAGTCAAGTAATGTGCTAATCTTTGATGATGATGTTGCTAAAATTGCAGATTTTGATTTATCAAATCAGGCTCCCGACATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGTTATCATGCTCCGGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTTGGCGTTGTCCTTCTGGAACTTCTGACTGGAAGGAAACCCGTTGATCATACACTACCACGTGGACAACAGAGTCTGGTTACTTGGGCTACACCAAAACTCAGTGAGGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCCGCTGTTGCTGCACTGTGTGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACTGCACGACCTGGACCTGCCGGTGAAACACCAAATTAA 1086 0.4319 MSCFSCCEEDDLHKAAESGGPYVVKNPAGNDGNYHASQTAKQGTQPVKPQPIEVPNISADELKEVTDNFGQDSLIGEGSYGRVYYGVLKSGQAAAIKNLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCIDGSSRILAYQFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARPGPAGETPN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0075 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Gso2g0075 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
Gso2g0075 361 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
Gso2g0075 361 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0075 361 CDD STKc_IRAK 75 348 - -
Gso2g0075 361 SUPERFAMILY Protein kinase-like (PK-like) 46 345 IPR011009 -
Gso2g0075 361 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Gso2g0075 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
Gso2g0075 361 PIRSF ILK 6 352 - -
Gso2g0075 361 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Gso2g0075 361 MobiDBLite consensus disorder prediction 31 50 - -
Gso2g0075 361 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0075 361 MobiDBLite consensus disorder prediction 17 50 - -
Gso2g0075 361 Gene3D Transferase(Phosphotransferase) domain 1 144 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0075 Gso-Chr2 851693 855673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0075 49 346 Receptor kinase-like Gene Family AT4G02010 50.331 1.75e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gso2g0075 PK_Tyr_Ser-Thr 6.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0075 K13436 - gmx:100808383 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0075 2 851693 855673 Gso2g0075 2 851693 855673 ECH
Gso2g0075 2 851693 855673 Gso10g0080 10 889933 893852 GST
Gso19g1856 19 47254576 47258258 Gso2g0075 2 851693 855673 PCT
Gso3g1891 3 44457180 44461026 Gso2g0075 2 851693 855673 PCT
Gso2g0075 2 851693 855673 Gso19g1856 19 47254576 47258258 PCT
Gso2g0075 2 851693 855673 Gso3g1891 3 44457180 44461026 PCT