Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0071 ATGGATGCGGAGAATGGCGAAGAGAGAAAACATCATGAGGCAAGCACGTCAGAGAATAGTGCAGAAACAAGCACGAATGGGGAGAAGAGAGAAAAGGGCAAACAAAAGGAAAAGCCAGAGACAGTTCCATTTCACAAGCTGTTCGCTTTTGCAGACTCCACTGACATTCTTTTGATGGCTGTTGGGACCATTGGTGCCATTGGAAATGGTTTGGGTTTGCCTCTCATGACTTTGCTGTTCGGTCAAATGATTGATAGCTTCGGTAGTAACCAGCAAAACACTCACGTGGTTGAAGAAGTATCCAAGGTTTCTCTTAAATTTGTGTACTTGGCAGTAGGATCTGGGATGGCGGCGTTTCTCCAGGTGACTAGTTGGATGGTCACTGGGGAGAGACAAGCTGCACGGATACGGGGATTGTATTTGAAAACTATTCTGAGACAAGATGTTGCTTTCTTTGATAAGGAAACGAACACGGGAGAGGTGATAGGGAGGATGTCTGGTGATACGGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTGCAGCTAATAGCAACATTCATTGGGGGATTTGTGATAGCATTTGTCAGAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACCCTTCCGCTTCTTGCTTTGTCAGGTGCTACTATGGCAGTCATCATAGGCAGGATGGCTTCTCGAGGTCAAACAGCTTATGCAAAAGCTGCACATGTAGTTGAACAGACCATTGGATCAATAAGAACTGTTGCGTCCTTTACTGGGGAAAAGCAAGCAGTATCTAGTTATAGCAAATTTCTTGTAGATGCTTACAAATCAGGAGTTCATGAAGGTTCCACAGCTGGCGCTGGTCTAGGCACAGTTATGTTAGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGCACGGTGATTAATGTGATTATTGCTGTGCTAACTGCTTCAATGTCTCTTGGACAGGCATCCCCTAGCATGAGTGCTTTCGCTGCAGGTCAGGCTGCAGCTTACAAAATGTTTCAGACAATTGAAAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATATTAGAAGATATTCAAGGCGAAATAGAGTTGAGGGATGTTGATTTCAGTTATCCTGCAAGACCTGAGGAACTGATATTTAATGGATTCTCTCTTCATATACCAAGTGGTACAACTGCGGCTTTAGTTGGACAAAGTGGAAGTGGAAAGTCTACGGTTATCAGCTTGGTAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGCATCAACCTGAAAGAATTTCAGCTTAGGTGGATTAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCGGTGTTGTTTGCATCTAGCATTAAGGATAACATTGCATATGGAAAGGAGGGAGCAACAATTGAAGAGATAAGATCTGCATCTGAACTTGCTAATGCTGCTAAATTCATTGATAAGCTTCCACAGGGATTGGACACGATGGTTGGTGAGCATGGAACTCAGCTGTCTGGTGGACAGAAGCAACGCATTGCCATTGCAAGAGCAATCCTGAAAAATCCGAGAATTCTACTTCTGGATGAAGCAACAAGTGCACTTGACGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTAGACAGGATCATGGTCAACAGAACTACTATTATAGTGGCGCATCGCTTGAGCACAGTGAGGAATGCTGATGTGATTGCTGTCATTCATAGAGGGAAGATGGTTGAGAAAGGAACACACATAGAATTACTAAAGGATCCTGAGGGAGCTTACTCTCAACTTATACGCCTACAAGAAGTAAACAAAGAGACAGAAGGAAATGCTGACCAACACAACAACAGTGAACTTTCTGTAGAATCCTTTAGACAATCTAGTCAAAAGAGATCACTTCAAAGATCTATTAGTAGGGGGTCATCCTTAGGGAATAGTAGCCGCCACTCCTTTTCAGTTTCCTTTGGTTTACCCACAGGAGTTAACGTTGCTGATCCTGAACATGAAAGCTCACAACCCAAAGAAGAAGCACCAGAGGTTCCACTCAGCCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTGTGATTGGATCTGTAGCTGCCATAGCAAATGGGGTTATATTTCCAATATTTGGCGTGCTGATTTCCAGTGTCATCAAGACATTTTATGAACCATTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCACTGATGTTTATGATCCTTGGTCTTGCATCATTTCTTATAATTCCTGCACGAGGATACTTTTTTGCGGTGGCAGGGTGTAAGTTAATCCAACGTATCAGGCAAATGTGTTTTGAGAAGGTTGTCAACATGGAGGTTAGTTGGTTTGATGAGCCTGAAAACTCAAGTGGTGCCATTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTTCGTGCCCTTGTCGGTGATGCGCTGGGACTATTGGTTCAAAATTTCGCAACTGTACTGGCAGGTTTGATTATTGCTTTCGTTGCATCTTGGCAGCTGGCATTAATTATTCTTGTCTTGATTCCTCTGATTGGAGTAAATGGATATGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAGACAAGGTTATGGAACTATACAAGAATAAATGTGAGGGCCCCATGAAAACAGGGATACGGCAAGGGTTGATCAGCGGATCAGGATTTGGGGTTTCATTTTTCTTACTGTTTTGTGTTTATGCAACCAGTTTCTACGCAGGAGCTAGACTTGTGGATGCTGGGAAGGCAACATTCTCAGATGTTTTCCGGGTTTTCTTTGCATTAACTATGGCAGCTATTGGAGTTTCCCAATCAAGCTCCTTTGCTCCTGACTCAAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATTATTGATAAGAAGTCAAAGATAGATCCTGGTGATGAATCTGGTAGCACACTGGACAGCGTTAAGGGAGAAATTGAGCTTCGTCATGTGAGCTTCAAGTATCCTTCTAGGCCTGATATACAGATTTTTCGAGACCTCAGCTTGACTATCCATTCTGGCAAGACAGTGGCTCTTGTTGGTGAAAGTGGAAGTGGAAAATCGACAGTGATTGCCTTGTTGCAAAGATTTTATAATCCTGATTCAGGCCAAATCACACTTGATGGGATAGAAATTCGTGAGTTACAGCTCAAGTGGTTAAGGCAGCAGATGGGTCTTGTAAGCCAAGAGCCAGTTTTGTTCAATGAAACTATACGTGCCAATATTGCCTATGGAAAAGGAGGTGATGCTACTGAAGCAGAAATCATAGCTGCAGCAGAAATGGCCAATGCACATAAATTCATTAGTGGCTTACAACAGGGTTATGATACTATAGTGGGAGAGAGAGGAACCCAATTATCTGGTGGGCAGAAGCAACGGGTAGCAATTGCTCGTGCCATAATTAAAAGTCCAAAGATATTGCTACTAGATGAGGCAACAAGTGCATTAGATGCTGAGTCAGAAAGAGTTGTTCAAGATGCGTTGGACAAAGTCATGGTGAACAGAACTACTGTGGTTGTGGCACATCGTCTATCTACAATAAAAAATGCAGATGTGATTGCTGTTGTAAAAAATGGAGTTATAGTGGAGAAAGGGAAGCATGAAAAGCTCATTAACATCAGTGGTGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCCTCAACAGTATGA 3849 0.4305 MDAENGEERKHHEASTSENSAETSTNGEKREKGKQKEKPETVPFHKLFAFADSTDILLMAVGTIGAIGNGLGLPLMTLLFGQMIDSFGSNQQNTHVVEEVSKVSLKFVYLAVGSGMAAFLQVTSWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFVRGWLLTVVMLSTLPLLALSGATMAVIIGRMASRGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYSKFLVDAYKSGVHEGSTAGAGLGTVMLVIFCGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILEDIQGEIELRDVDFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTIIVAHRLSTVRNADVIAVIHRGKMVEKGTHIELLKDPEGAYSQLIRLQEVNKETEGNADQHNNSELSVESFRQSSQKRSLQRSISRGSSLGNSSRHSFSVSFGLPTGVNVADPEHESSQPKEEAPEVPLSRLASLNKPEIPVLVIGSVAAIANGVIFPIFGVLISSVIKTFYEPFDEMKKDSKFWALMFMILGLASFLIIPARGYFFAVAGCKLIQRIRQMCFEKVVNMEVSWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNFATVLAGLIIAFVASWQLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYKNKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATSFYAGARLVDAGKATFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDKKSKIDPGDESGSTLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYNPDSGQITLDGIEIRELQLKWLRQQMGLVSQEPVLFNETIRANIAYGKGGDATEAEIIAAAEMANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHEKLINISGGFYASLVQLHTSASTV* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0071 1282 MobiDBLite consensus disorder prediction 625 669 - -
Gso2g0071 1282 Gene3D - 380 637 IPR027417 -
Gso2g0071 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1037 1274 IPR003439 GO:0005524
Gso2g0071 1282 MobiDBLite consensus disorder prediction 1 38 - -
Gso2g0071 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 60 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g0071 1282 Gene3D ABC transporter type 1, transmembrane domain 105 1011 IPR036640 GO:0005524|GO:0016021
Gso2g0071 1282 MobiDBLite consensus disorder prediction 24 38 - -
Gso2g0071 1282 PANTHER - 17 1278 - -
Gso2g0071 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 705 1020 - -
Gso2g0071 1282 CDD ABC_MTABC3_MDL1_MDL2 382 620 - -
Gso2g0071 1282 SUPERFAMILY ABC transporter transmembrane region 40 366 IPR036640 GO:0005524|GO:0016021
Gso2g0071 1282 ProSitePatterns ABC transporters family signature. 1177 1191 IPR017871 GO:0005524
Gso2g0071 1282 SUPERFAMILY ABC transporter transmembrane region 703 1021 IPR036640 GO:0005524|GO:0016021
Gso2g0071 1282 SMART AAA_5 1064 1257 IPR003593 -
Gso2g0071 1282 SMART AAA_5 409 595 IPR003593 -
Gso2g0071 1282 MobiDBLite consensus disorder prediction 1 17 - -
Gso2g0071 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1028 1274 IPR027417 -
Gso2g0071 1282 Coils Coil 616 636 - -
Gso2g0071 1282 ProSitePatterns ABC transporters family signature. 521 535 IPR017871 GO:0005524
Gso2g0071 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 620 IPR027417 -
Gso2g0071 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 618 IPR003439 GO:0005524
Gso2g0071 1282 Pfam ABC transporter 401 549 IPR003439 GO:0005524
Gso2g0071 1282 Pfam ABC transporter 1056 1205 IPR003439 GO:0005524
Gso2g0071 1282 Gene3D - 1027 1281 IPR027417 -
Gso2g0071 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 343 - -
Gso2g0071 1282 Pfam ABC transporter transmembrane region 716 987 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g0071 1282 Pfam ABC transporter transmembrane region 60 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g0071 1282 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 17 1278 - -
Gso2g0071 1282 MobiDBLite consensus disorder prediction 632 669 - -
Gso2g0071 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 716 1002 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g0071 1282 CDD ABC_MTABC3_MDL1_MDL2 1037 1275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0071 Gso-Chr2 817875 824233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0071 35 1276 Calmodulin-binding Proteins AT2G36910 45.505 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0071 K05658 - gmx:100800034 2363.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0071 2 817875 824233 Gso2g0071 2 817875 824233 ECH