Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0066 ATGGAAAACCATCACCAAATATTGCAACAACCAAACCGTGAATTTACCTTACTAAGATCCACCGATTTCCTCCGCCAGAATCTCAATCTAGATCCCCCAACCATCAACACCGGAAAACATGTCGATCCTTCCATCAAAGAAGTGGATTTTTTCTCATCAAGTTCATCACCACCAAAGAACAGTGACACTTATAACTCGAGTCAAGAAGAATCGCGTGATCGTCGTACAAACATGGCTAAAGACGATAGATCACCAACTCTTTTCAATGATCAGCTCGTAAACACTGCGCTAAATCTAAGTCCGGGTGCTGGGGTGTCAAGATCAGCAGCAAATGATGAAAACCTTAAAACTTTGCTGAATACACTTCAAAGGGAATCGCTTAGATTACAAGAAGAGAATTGCAAACTGAGATCTATGTTGGACCAAATCACCAAAAACAACTACCAGTTACAATTGTTCATTGCTTTGCAGAAGCAAAAGCAGTGTCAGAAGGTGGAGACAAATTCGATGATATTTGGCCAACATTTACTGGACCCACGACCATGCACCAAATTAGACGCTCAAGTTGCATCATTTCCAGATGATAAATCTGGTCAACAGGGTGATCCCGTAGAAGATGTTCTTGAACAAACGTCCTCACACAGTTGGGGGTCATCCAAGAGCCCCACCTTTGAAAAATCCAAGCCTAGTGAGCTTCCTTTCAAAAAAACCAGAGTTTCCGTGCGTGCAAAATCAGAAGCTCCTTTGATTAGTGATGGATGTCAATGGAGGAAATATGGACAAAAAATAGCCAAGGGTAATCCTTGTCCCCGTGCCTATTATCGTTGCACTATGGCCGTAGGATGCCCAGTTCGTAAGCAGGTGCAACGATGCATGGAGGACAAGACGGTGTTGATAACAACCTATGAAGGCAATCATAACCATCCTCTTCCACCCTCAGCCACAGTCATGGCCAATTCTACCTCAGCAGCTGCAGCTATGCTCTTATCTTCTTCATGTTCAATATCTAATACCGAAGCACTAAGTAACACTGTAGGAGTATTCTCTTCCATGCCCTACATCCCAATGGCAACCCTCTCAACATCTGCACCATTTCCTACTATCACCCTTGACATGACCACCAACCCTATGCAACTGCATCGGGAAACTTCCTCTGCCCTAACATCCCTTCTTCCATTGCATGCAACTTCTATTCCCCAGCTACTAGGACACCCTGTCATCTTCCCCCACAAGATGCCACATCCACTAGGCCAACAACAACAACCTTTGTTTTTGACTGAGACGATGAGTGCAGCTATTGCTTCGAATCCGAATTTCACTATAGCATTAGCAGCAGCTATCTCATCAATTATTGGAGCTCCTATAGGCACTGATGGAAACAACAACAATAGTAGCAATGGCGGAAGTCATGTTCTTCCTCTTAATGGGGCATCTATGTTGCCTGGATCCACTTAG 1455 0.4405 MENHHQILQQPNREFTLLRSTDFLRQNLNLDPPTINTGKHVDPSIKEVDFFSSSSSPPKNSDTYNSSQEESRDRRTNMAKDDRSPTLFNDQLVNTALNLSPGAGVSRSAANDENLKTLLNTLQRESLRLQEENCKLRSMLDQITKNNYQLQLFIALQKQKQCQKVETNSMIFGQHLLDPRPCTKLDAQVASFPDDKSGQQGDPVEDVLEQTSSHSWGSSKSPTFEKSKPSELPFKKTRVSVRAKSEAPLISDGCQWRKYGQKIAKGNPCPRAYYRCTMAVGCPVRKQVQRCMEDKTVLITTYEGNHNHPLPPSATVMANSTSAAAAMLLSSSCSISNTEALSNTVGVFSSMPYIPMATLSTSAPFPTITLDMTTNPMQLHRETSSALTSLLPLHATSIPQLLGHPVIFPHKMPHPLGQQQQPLFLTETMSAAIASNPNFTIALAAAISSIIGAPIGTDGNNNNSSNGGSHVLPLNGASMLPGST* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0066 484 MobiDBLite consensus disorder prediction 208 226 - -
Gso2g0066 484 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0066 484 MobiDBLite consensus disorder prediction 208 231 - -
Gso2g0066 484 MobiDBLite consensus disorder prediction 66 81 - -
Gso2g0066 484 MobiDBLite consensus disorder prediction 461 484 - -
Gso2g0066 484 MobiDBLite consensus disorder prediction 49 85 - -
Gso2g0066 484 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 483 IPR044810 GO:0003700
Gso2g0066 484 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0066 484 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 40 483 - -
Gso2g0066 484 Coils Coil 112 132 - -
Gso2g0066 484 SUPERFAMILY WRKY DNA-binding domain 244 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0066 484 MobiDBLite consensus disorder prediction 49 65 - -
Gso2g0066 484 Gene3D WRKY domain 235 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0066 484 Pfam WRKY DNA -binding domain 252 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0066 Gso-Chr2 772153 776661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0066 122 451 WRKY Transcription Factor Family AT4G04450 41.432 1.62e-75 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g0066 WRKY 7.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0066 - - gmx:100785933 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0066 2 772153 776661 Gso10g1276 10 38732731 38737770 GST
Gso19g1867 19 47352136 47356956 Gso2g0066 2 772153 776661 PCT
Gso3g1904 3 44571104 44575457 Gso2g0066 2 772153 776661 PCT
Gso2g0066 2 772153 776661 Gso19g1867 19 47352136 47356956 PCT
Gso2g0066 2 772153 776661 Gso3g1904 3 44571104 44575457 PCT