Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0042 ATGGGGAGGACAGGGAAATGGCTTAGGAACTTGTTGACAGGGAAGAGATCAGACAGAGAGAAAGAGAAGGAAAAATGTGGTACCAACATGTGTTTGTTGAGTGGCACAAGCACACCAGTTTCAACAACAACAACAACCACCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCTTCTAGGGAACTCAATCTTGCAGAATTTGGTGTCACTGCTTCTTCAGTCACAGTGCAAAATGATCAAAATGCTGAGAATGATCAAAGGAAGCATGATCCTGATTCCAATGGATTGTCAACAAGATGTGTTGAAGAGGCTGCAGCCATTAAAATTCAATCGGTGTTTCGGTCCTACTTGGCAAGAAAGGCACTGTATGCTCTTAGAGGACTAGTGAAGTTGCAGGCACTAGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTGAGATGCATGCAGGCTTTAGTCATAGCACAATCCAGGGCTCGTGCTCAGAGGGCGCGAATGGTGTCAGACGGAAAACTTGATCAAAAGCTATCACCCAACAGAATAACCACAGAGGAAAACTTCTCCATGCATATGTATAATGAAATGCACAATGGTTTGGAGGAGAATGCCAAGATTGTGGAGATGGCTGTTTGTGAATCCAAAGGTAACTCAAGAGGCAGAAACAGCTCTGTGAATCGCGAACCTTCTGATCATAGATTTTCTGCATATTATTCATCAAACGGTTCATACTCAAAGGAGGAAAACTACAATGCATCACCTGCACCATCAACACTGACAGAATTGAGTCCAAGAGCATGCAGTGGTCATTTTGAGGAGTGTTCCTTCAGCACAGCACAAAGTAGTCCCTATTACTACTCAGAAGTGTCAGGAGTGGATAATACAATTACAAAGGTTCCTTTTGCATTCCCTATACCAGCATACACAGAACCCATGTCCTATGACTACCCTTTATTTCCAAACTACATGGCCAACACAAAATCATCAAGGGCCAAAGCCAGATCACAGAGTGCACCAAAGTCAAGGCCGGATTCGTACGAGAGGCAACCGAGCCGACGAAGAGCTTCAATTGAAGGAAGAAATGTCCCAAAGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTCACTGCCCAAAACTACCAATATCCATGCTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCCACAAGTACAGTTCTCACAAACACAAACTCTAATTACTGCACATGA 1254 0.445 MGRTGKWLRNLLTGKRSDREKEKEKCGTNMCLLSGTSTPVSTTTTTTKEKRRWSFRRSSASRELNLAEFGVTASSVTVQNDQNAENDQRKHDPDSNGLSTRCVEEAAAIKIQSVFRSYLARKALYALRGLVKLQALVRGHLVRKQARETLRCMQALVIAQSRARAQRARMVSDGKLDQKLSPNRITTEENFSMHMYNEMHNGLEENAKIVEMAVCESKGNSRGRNSSVNREPSDHRFSAYYSSNGSYSKEENYNASPAPSTLTELSPRACSGHFEECSFSTAQSSPYYYSEVSGVDNTITKVPFAFPIPAYTEPMSYDYPLFPNYMANTKSSRAKARSQSAPKSRPDSYERQPSRRRASIEGRNVPKPVRMQRSSSHVGVTAQNYQYPCSIKLDRSIVSECGSTSTVLTNTNSNYCT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0042 417 Gene3D - 104 156 - -
Gso2g0042 417 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Gso2g0042 417 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 405 - -
Gso2g0042 417 MobiDBLite consensus disorder prediction 84 98 - -
Gso2g0042 417 MobiDBLite consensus disorder prediction 348 363 - -
Gso2g0042 417 MobiDBLite consensus disorder prediction 1 24 - -
Gso2g0042 417 Pfam IQ calmodulin-binding motif 131 147 IPR000048 GO:0005515
Gso2g0042 417 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Gso2g0042 417 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Gso2g0042 417 MobiDBLite consensus disorder prediction 330 347 - -
Gso2g0042 417 MobiDBLite consensus disorder prediction 77 98 - -
Gso2g0042 417 PANTHER IQ-DOMAIN 5-RELATED 1 405 - -
Gso2g0042 417 Pfam Protein of unknown function (DUF4005) 296 364 IPR025064 -
Gso2g0042 417 MobiDBLite consensus disorder prediction 330 377 - -
Gso2g0042 417 SMART iq_5 126 147 IPR000048 GO:0005515
Gso2g0042 417 SMART iq_5 103 125 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0042 Gso-Chr2 495765 498468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0042 1 412 IQD Protein Family AT4G14750 45.067 1.19e-89 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0042 - - gmx:100810189 787.719