Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0012 ATGGACACATCACTAGTGTTTACTGTGAGGAGGAGTGAGGCAGAGCTGATAGCTCCGGCGAAGCCCACCCCTCGTGAAGTGAAGCTACTCTCAGACATAGATGACCAAGATGGGTTACGTTTCCAAATTCCGGTGATACAGTTCTATCGCCACGACCCATCAATGGCAGGGAAAGACCCTGTCGATGTGATAAGAAAGGCTGTGGCCAAAACGCTTGTGTTTTACTATCCTTTTGCAGGTAGGCTTAGGGAAGGACTTGGTCGGAAACTGATGGTGGATTGTACTGGGGAAGGTGTTTTGTTCATTGAGGCTGATGCAGATGTCACTCTTAAGCAATTTGGTGATGCTCTTCAACCTCCTTTCCCGTGCTGGGAGGAACTCCTTTATGATGTACCTGGTTCTCAAGGAGTGCTTAACACTCCCCTTCTGCTTATTCAGGTAACGCGGCTCAAGTGCGGGGGTTTCATATTAGCTGTCCGGCTGAACCACACGATGAGCGACGCAGCCGGTCTGGTTCAGTTCATGAGCGCGCTGGGAGAAATAGCTCGTGGGAGGCAGGAGCCGTCGATCCCACCGGTGTGGCGCAGAGAGCTCCTGAACGCGCGGGACCCACCTCGAGTCACATGCACCCACCGCGAATACGAACATGTCCCTGACACCAAAGGCACCATCATCCCCTTAGACCACATGGCCCATCGCTCTTTCTTCTTCGGCCCCAGTGAAGTCGCCGCCATCCGCTCCCTCATCCCCCAAACTGATCAACGCTGCTCCAACTTCGAGGTCCTCACCGCATGCCTCTGGCGCTGCCGCACCATTGCGCTGCAGCCCGACAAAGACGAGGAGGTTCGCATCCTCTGCATAGTCAACGCTCGCTCCAAGTTTGACCCTCCTCTGCCTAGCGGTTACTACGGCAACGCTTTTGCCTTCCCCGTTGCTGTCACCACTGCGGGGAAGCTGTGCGATAACCCTTTGGGATACGCTCTCGAGTTGGTGAGGAAAGCCAAAGCGGATGTGACTGAGGAATACATGCACTCGGTGGCTGATTTAATGGTCACCAAGGGCCGGCCTCACTTCACTGTTGTGAGATCGTATCTCGTGTCGGATGTGACTCGTGCTGGGTTTGGAAACATTGAGTTTGGGTGGGGGAAGGCTGTTTATGGAGGACCCGCCAAGGGAGGGGTTGGAGCCATACCTGGTGTTGCTAGCTTTTACATACCCTTTAAGAATGCTAAAGGAGAGGAAGGGTTGGTTATACCGGTTTGTTTGCCTTCTGAAGCCATGGAGAGGTTTCAGAAGGAGTTGGACTGTGTGCTTAACCACCACATCGTCCAACCTAGTGCCATTGCTCCAAACTCTAGGTTCATTGTTTCTTCCTTGTAG 1380 0.5341 MDTSLVFTVRRSEAELIAPAKPTPREVKLLSDIDDQDGLRFQIPVIQFYRHDPSMAGKDPVDVIRKAVAKTLVFYYPFAGRLREGLGRKLMVDCTGEGVLFIEADADVTLKQFGDALQPPFPCWEELLYDVPGSQGVLNTPLLLIQVTRLKCGGFILAVRLNHTMSDAAGLVQFMSALGEIARGRQEPSIPPVWRRELLNARDPPRVTCTHREYEHVPDTKGTIIPLDHMAHRSFFFGPSEVAAIRSLIPQTDQRCSNFEVLTACLWRCRTIALQPDKDEEVRILCIVNARSKFDPPLPSGYYGNAFAFPVAVTTAGKLCDNPLGYALELVRKAKADVTEEYMHSVADLMVTKGRPHFTVVRSYLVSDVTRAGFGNIEFGWGKAVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPSEAMERFQKELDCVLNHHIVQPSAIAPNSRFIVSSL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0012 459 PANTHER - 8 443 - -
Gso2g0012 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
Gso2g0012 459 Gene3D - 217 434 IPR023213 -
Gso2g0012 459 Gene3D - 8 216 IPR023213 -
Gso2g0012 459 Pfam Transferase family 9 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0012 Gso-Chr2 142944 144885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0012 13 434 Monolignol Biosynthesis Gene Families AT5G48930 30.000 2.45e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0012 K19861 - gmx:100797017 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0012 2 142944 144885 Gso10g0003 10 43904 47155 GST