Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0008 ATGGATCGCTTTTTTCCTGAGAAAATTCTCGGTGAGATTTTCTGGGATGAACCTTTTTTGGCCACTGATCAAAGTGATTTAGTTCAATATTCCCAGATTAACAAGGCTGAAGCTTCCCCTCCTGCAGCAACTCCAAGCGCTTTTGTTCAATATAGAGACCTACCCAGAAGAATTAATTCTCTAAACGGGTCAAATTCCCAGATCATGAGTAAGAAAATGCTTGCGTTCTTGAGAAAAAGTTGGCCTTGGCCTGTGGAGAGAAATAACGTACAAGAGAATGAGAGAAACCGTAGTTTCAGGCACATGATCAACGAAAGAATGAGAAGACAGAGGCAGAGGCAGTGTTGTTTGGCGCTGCATTCAATATTACCACAAGGAACAAAAACGGATAATAATTCTGTAATTCAAATGGCGGCAAAGGAGATTGTACGGCTACAAGGATGCAGAGAAGAGTTGCAAAGGAAAAATGTTGAGCTTGAAGCAAATCTTGAAGGTGTTGAGAGCAGCAAAGGTAGCGGAAGTAAAGTTCAATATTTGAGAGTTCCACATCCTAAGTCTGGAATTGATTCTATGGTTGAGATCCTCAAATGCTTGAAAGACAAAGGAGTCGATACCAGAAGCATCAAATCAACTTTCTCCCCACAGGAGTTGTTTGCAGTGTTAGAGACAGAAACTGATGAGGTTGCAGATGCTGATGTTGAAAGCGCTACTTGGGGAACACATGATGAACTTGATTGGAAGCTTCATTCCGATGCCCGGGAAGGTTCAAATAAAAAGCAAAAGACTATACATTAA 795 0.4126 MDRFFPEKILGEIFWDEPFLATDQSDLVQYSQINKAEASPPAATPSAFVQYRDLPRRINSLNGSNSQIMSKKMLAFLRKSWPWPVERNNVQENERNRSFRHMINERMRRQRQRQCCLALHSILPQGTKTDNNSVIQMAAKEIVRLQGCREELQRKNVELEANLEGVESSKGSGSKVQYLRVPHPKSGIDSMVEILKCLKDKGVDTRSIKSTFSPQELFAVLETETDEVADADVESATWGTHDELDWKLHSDAREGSNKKQKTIH* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0008 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 161 IPR036638 GO:0046983
Gso2g0008 264 Coils Coil 135 169 - -
Gso2g0008 264 PANTHER TRANSCRIPTION FACTOR BHLH92 1 253 - -
Gso2g0008 264 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 253 IPR044658 -
Gso2g0008 264 Pfam Helix-loop-helix DNA-binding domain 100 146 IPR011598 GO:0046983
Gso2g0008 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 145 IPR011598 GO:0046983
Gso2g0008 264 Gene3D - 86 162 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0008 1 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 36.052 1.49e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0008 - - gmx:100815874 500.36