Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0002 ATGGCTTTACAGAACATTGGTGCTGCAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAGGATGATTACCAAAATTGAGGGCAGAGGTAACGGCATCAAAACTAATGTTGTCAATATGGTTGATATTGCCAAGGCATTGGCAAGGCCTGCGTCTTACACGACCAAGTATTTTGGTTGTGAACTTGGGGCCCAGTCAAAATTTGATGAGAAGACCGGCACTTCTCACGTCAATGGAGCACATGATACTGTTAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTTCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATCACTAAGAACCAAATGATCCAGCTGAAATGCGCTGCTTGTGGTTTTGTGTCTGATGTTGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAACCCTCCAGAGGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAAATGGCTGATGAGGAACAGAAGAAAGTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCTTCAAAAGATGGCACTGCTAAATCCACCTCTTCAAAGAAGAAAGCAAGTGGCTCTGATGAAGACCGCACTTCACCTACTCACAGTCAAATTGATGAGAAAGAGGAGGCTCCAGATGAAGATGATGGTGATGATGACGTGCAATGGCTGACAGATACATCACTTGATGCTGCTCGTCAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGAAGAAGAAAAAAGCAGCAAGTAACGGAAATGGCGGTTCTCAGAATGGTAACTCAATGCACTATGGGACCCTGGTTGGGGAAGTGAAAGCTAATTTGAAGAAAGGTATTGGAGCGAATGAATTGCTGTCCCATCTTTCAGCACATCCTGCACCTGCTCAAGAAAAGATGAGTGCTCTGGTTGAAGCTCTATTCGAGGGAACTGAGAAAGGTTTTGCTAAAGAAGCTGATAAGAAGAAGAACTACTTTGCTGCTGCTGTTGCCGAAGAGGGATCCCAGCTGTTATTGCTTCATGCTATTGAAGAATTTTCTTGCAAGTCTACTTCCAATGCTTTGAAGGAGGTTGCCCTGGTTCTAAAGGCACTCTATGATGCTGATGTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAAAAGGGACTGAAGGGCGATAACAAGAACTCTAAGATTTTGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAGTGCAGAATCAGAAACCGAGGAAGAATAA 1329 0.4319 MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTVKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGEMADEEQKKVKKEVKKKGSSSSKDGTAKSTSSKKKASGSDEDRTSPTHSQIDEKEEAPDEDDGDDDVQWLTDTSLDAARQRIQEQLSAVTADMVMLSTDEPEKKKKAASNGNGGSQNGNSMHYGTLVGEVKANLKKGIGANELLSHLSAHPAPAQEKMSALVEALFEGTEKGFAKEADKKKNYFAAAVAEEGSQLLLLHAIEEFSCKSTSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDNKNSKILKNAQPFIDWLQSAESETEEE* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0002 442 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 442 - -
Gso2g0002 442 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Gso2g0002 442 Gene3D - 105 145 - -
Gso2g0002 442 SMART 542_3 351 438 IPR003307 GO:0005515
Gso2g0002 442 Gene3D - 293 433 - -
Gso2g0002 442 CDD W2_eIF5 326 440 - -
Gso2g0002 442 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Gso2g0002 442 SUPERFAMILY ARM repeat 293 436 IPR016024 -
Gso2g0002 442 MobiDBLite consensus disorder prediction 148 224 - -
Gso2g0002 442 Gene3D - 2 104 - -
Gso2g0002 442 MobiDBLite consensus disorder prediction 270 290 - -
Gso2g0002 442 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Gso2g0002 442 ProSiteProfiles W2 domain profile. 283 442 IPR003307 GO:0005515
Gso2g0002 442 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 442 IPR045196 GO:0003743|GO:0006413
Gso2g0002 442 MobiDBLite consensus disorder prediction 147 238 - -
Gso2g0002 442 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Gso2g0002 442 Pfam eIF4-gamma/eIF5/eIF2-epsilon 364 442 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0002 Gso-Chr2 29505 32120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0002 1 435 Eukaryotic Initiation Factors Gene Family AT1G77840 63.122 1.24e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0002 K03262 - gmx:100777906 798.505