Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g2022 ATGAGTGGTTCTCGCAGATGCAATGGCGATTGCCATGGCGATCAGAACCCAGCTACTCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCTTGGATGAGTTCGACAAGTTACACGTCCAAGTTGAGAAGCCGAGGGAGCAAGTTGCAGATGCGGAGGCACTGCTGGATCTCACACGCACTCTAGTGGGATCTGTTAAGTCGTTGACGAATGAGGGCGTCACACCTTCTCAATTTGTTTCATCTTTGCTCATACGCTACGCCCACGCCCAACACTCAATTGATTGGCACCAACTTGGCCTTGCCGCCTCCCCAATCTTCCTCTCCTTTCATGGCTCTTCTACCATGCTTGGTCCCATGGACAACCAGTTTAAGCAACGCAAAACTGGAGTGCCCAGAAACCGCAATCCTCGCCAAATTGCAACTACTAGACCTCTACAGGTTGATGAGGCTGTTACAGAGGAAAATACTGATACCGACAAAAACATGGCCACTATGTTTCACATCTTAAGGAGGACAAAGCGTGTCCCACTTGAAAACTTAATTTTGAACAGGGAGTCTTTTGCTCAGACTGTGGAAAACTTGTTTGCCCTATCATTCCTAGTGAAAGATGGACGTGCTGAGATCAGTCTTGATGAAAATCGTTTGCACTATGTTTCACCTAAAAATGCTCCAGCTGCCAACTTAGTATCATCAAAAGAAGTTTCTTATACTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGTTAATGAAAGATGTGGTGCCTGATGGAAAAGAATTAATGCCACGCCGGACTCAATGTTGCACTGTAGTTGCCTCCCAGGAAGGTATGAGTGATGACAATTTCCAACCTGCTTTGGCTGTAACACCCATCAGGAAGCTATCACGGAACCGAGGTCGGGTTGTGCAGGAGGAAGGTGTTGTAGAAGAATCTCCTGAATGCAATGAGGAAAATGCTTCCAGAGCAGGGGCAATTCGTAGGTGTAAGCGTAAGCTTCATTAA 1071 0.4603 MSGSRRCNGDCHGDQNPATRRVIRSQFLQLKNFINEKRDDLMNTESDKFDTILDEFDKLHVQVEKPREQVADAEALLDLTRTLVGSVKSLTNEGVTPSQFVSSLLIRYAHAQHSIDWHQLGLAASPIFLSFHGSSTMLGPMDNQFKQRKTGVPRNRNPRQIATTRPLQVDEAVTEENTDTDKNMATMFHILRRTKRVPLENLILNRESFAQTVENLFALSFLVKDGRAEISLDENRLHYVSPKNAPAANLVSSKEVSYTHFVFRYDYQDWKLMKDVVPDGKELMPRRTQCCTVVASQEGMSDDNFQPALAVTPIRKLSRNRGRVVQEEGVVEESPECNEENASRAGAIRRCKRKLH* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g2022 356 PANTHER UNCHARACTERIZED 16 355 IPR027786 GO:0005634|GO:0006281|GO:0030915
Gso20g2022 356 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 16 355 - -
Gso20g2022 356 Pfam Nse4 C-terminal 197 279 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g2022 Gso-Chr20 50761554 50763895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g2022 20 355 Non-SMC Element family AT1G51130 51.149 6.70e-114 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g2022 20 50761554 50763895 Gso10g2602 10 52933908 52936539 GST