Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g2003 ATGTCTCGAGCTGAGGAGCTTTGGGAGCGGTTAGTCCGTGCTGCATTGAGGAGGGAAAGGACTGGTGATGATGCATACGGGCAGCCTGTTGGTGGAATTGCTGGAAATGTACCATCCGCCCTAGCTAAAAATAGGGATATCGATGAAATTTTGAGAGTTGCTGATGAAATTGAAGATGATGATCCCAATATCTCTAGAATATTATGTGAGCATGCATATTCATTATCTCAAAATTTGGATCCTAACAGTGAAGGCCGAGGTGTTTTACAATTCAAGACTGGTTTGATGTCTGTCATCAAGCAAAAGCTGGCTAAAAGAGAAGCTGGAACCATAGATAGAAGTCAGGACATAGCTCGGTTACAAGAGTTCTACAAGAGTTATAGAGAGAAGCATAATGTGGATAAATTACGTGAGGAAGAAATGAAGTTACGGGAATCTGGTGCTTTCAGCCGGGATCTTGGCGAGTTGGAGCGCAAGACTGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTGGGAACAGTACTTGAGCAGCTGAGTGAAGAAATTCCTGATGAGCTGAAGCGAGTCATGGACTCAGATTCTGCATTGACAGAGGATCTGGTTGCGTACAACATCATCCCGTTAGATGCTTCCTCTTCAACAAATGCTATTGTTTATTTCCCTGAGGTGCAAGCAGCAGTTTCAGCTTTGAAGTATTTCAATGGCTTGCCGGAGTTGCCTAGGGGCTATTTCCTTCAACCTACAAGGAATGCTAACATGTTCGATTTTTTGCAGTGTACCTTTGGATTTCAGAAAGACAATGTAGCTAATCAGCATGAACACATAGTTCACCTGCTTGCAAATGAGCAATCTCGACTAAGAATTCCAGAAGGAGCTGAACCCAAATTGGATGAAGTTGCCGTGCAGGAAATATTCCTTAAGTCCCTTCAGAATTACATAAAGTGGTGTGATTATTTAGGCATTCAGCCTGTTTGGAGCAGTTTGGAGGCTGTCAGTAAAGAGAAGAAATTACTATATGTTTCTTTGTACTTCCTAATATGGGGTGAAGCCTCAAATATCAGATTTCTACCAGAATGCTTGTGCTACATATACCATCATATGGCTAGAGAGATGGATGAGATTTTAAGGCAGCAGATTGCACAGCCAGCTAATAGTTGCACTTATGATTCTAAGGATGGTGTCTCATTTCTTGATAATGTTATCTTTCCTCTCTATGATATCGTTTCCGCAGAAGCTGCAAACAATGATAATGGGAAAGCACCTCATTCCTCGTGGAGGAATTATGATGATTTTAATGAGTATTTCTGGTCACTCCGTTGCTTTGAGCTTAGTTGGCCATGGCGCAAAACTTCTTCGTTTTTCCAAAAGCCACTACCCAGATCAAAGAGAATGCTTATATCTGGCAGCAGTAGGCATCAGGGGAAAACATCTTTTGTGGAGCATCGAACTTTTTTTCATCTTTATCATAGCTTCCACCGATTGTGGATATTTCTATTCATGATGTTTCAGGGTCTAACCATCCTTGCATTCAATGATGGAAAGTTTAATGCCAAGACTTTGCGAGAAATTCTTAGTCTTGGACCTACATTTGTTGTGATGAAACTTTTTGAGAGTGTTCTGGACATTTTCATGATGTATGGTGCATATTCAACAACAAGACGCTTAGCTGTCTCTCGAATTTTTTTACGTTTTCTTTGGTTTAGCCTTGCTTCAGTTTTCATAACTTTCCTTTATGTAAAAGCACTCCAGGAAGAGAGTAAAAGTAATGGAAACTCGGTTGTCTTCAGATTGTATGTGATTGTCATAGGGATTTATGCTGGTGTCCAATTTTTCATTAGTTTCCTCATGCGGATACCGGCATGTCATCGTCTAACAAATCAATGTGGTCGTTGGCCTTTAGTTCACTTTGTGAAGTGGCTGCGCCAGGAACGGCATTATGTTGGACGGGGAATGTATGAAAGGAGTTCAGATTTCATAAAGTATATGCTGTTTTGGCTTGTTATTTTGAGTGGAAAATTTGCATTTGCTTACTTTCTTCAGATCAGGCCTCTGGTGAAACCAACAAAGGCTATTATAATAGCGGATAACATAAATTACTCTTGGCATGATTTTGTCTCTAAAAATAATCATAATGCTTTGACAGTTGTTAGCGTGTGGGCTCCTGTGGTTGCTATTTATCTTCTAGATATTTATGTGTTTTACACACTTGTATCGGCTGTCTACGGATTCTTACTGGGGGCAAGAGATCGACTGGGAGAGATTAGGTCATTGGAAGCACTGCACAAACTTTTTGAGCAGTTTCCTGGAGCTTTTATGGACACACTTCATGTTCCTCTACCCAACAGGAGTTCCCATCAGTCTTCTGTTCAGGTTGTGGAGAATAGCAAGGCTGATGCTGCTCGGTTTGCCCCCTTTTGGAATGAGATCATAAGAAATCTAAGGGAGGAGGATTATGTTACCAACTTCGAAATGGAGTTGCTTTTAATGCCTAGGAATTCTGGGGATCTTCCTCTGGTTCAATGGCCACTTTTTCTACTTGCAAGCAAGATATTTTTGGCTAGGGATATTGCTGTTGAGAGTAAAGATACTCAAGATGAGCTTTGGGATAGGATTTCCCGAGATGATTATATGATGTATGCTGTTCAGGAGTGTTACTATACTATTAAATTCATTTTGACAGAGATATTAGATGATGTGGGAAGGAAGTGGGTTGAAAGGATATATGATGATATTAATGCTAGTATCACAAAGAGGAGTATTGATGGGGACTTCAAACTAAGTAAATTGGCTGTTGTGATATCAAGAGTAACTGCATTGATGGGAATCCTGAAAGAGACTGAAACACCTGAACTGGAAAGGGGTGCAGTTAGGGCTGTGCAGGATCTGTATGACGTTATGCGACATGATGTCCTTAGCATAAATCTGAGGGAGAATTATGACACGTGGAGTTTACTGAGCAAAGCTAGGGATGAAGGGCATTTGTTTGAAAAGTTAAAATGGCCCAAGAATACAGATTTAAAAATGCAAGTCAAAAGATTGTATTCACTGCTGACTATCAAAGAGTCTGCCTCAAGCATTCCTAAAAACCTTGAGGCCAGGCGACGGCTGCAGTTTTTCACAAATTCACTTTTTATGAAGATGCCTCGTGCAAAGCCAGTTCGGGAGATGTTATCCTTTAGTGTTTTCACTCCTTATTATTCTGAGATTGTGCTTTATAGCATGGCTGAACTCCTAATGAAAAATGAAGATGGCATTTCAATTTTGTTCTACCTTCAGAAGATATATCCAGATGAGTGGAAAAACTTTCTTGCCCGAATTGGCCGTGATGAAAACACACTTGAGAGTGAACTTTATGATAATCCTGGTGATATTCTTGAACTGCGATTTTGGGCTTCATATCGGGGGCAAACATTGGCTAGGACAGTTCGGGGGATGATGTATTATAGGAAAGCTCTTATGCTTCAGACCTATTTGGAGAGGACAACTGCTGGAGATTTGGAGGCTGCAATAGGTTGTGATGAAGTAACTAATACGCATGGCTTTGAATTATCCCCTGAGGCACGTGCCCAGGCAGATCTTAAGTTCACTTATGTTGTGACATGTCAAATTTATGGTAAGCAGAAAGAAGAGCAAAAGCCTGAGGCTGCTGATATTGCTTTACTTATGCAAAGAAATGAAGCTCTTCGGGTCGCTTTCATTGATGTTGTTGAAACTTTAAAAGAGGGAAAAGTGAACACAGAATACTACTCAAAGCTTGTGAAAGCTGATATCAATGGGAAAGACAAGGAGATATACTCAGTAAAATTACCTGGAAATCCCAAATTGGGAGAAGGGAAGCCCGAGAATCAAAATCATGCAATTATATTTACGCGTGGAAATGCAGTCCAAACAATTGACATGAATCAGGATAACTATTTTGAGGAGGCTTTGAAGATGAGGAACCTTCTTGAAGAATTTCATTCAGATCATGGGCTTCGTCCTCCTACTATACTTGGTGTTAGAGAACATGTCTTCACTGGCAGTGTCTCATCTTTAGCATCATTTATGTCCAATCAAGAAACTAGTTTTGTGACTTTGGGGCAGCGAGTTTTAGCAAATCCATTGAAGGTCCGCATGCACTATGGGCATCCTGATGTTTTTGATAGAATATTCCACATAACCCGTGGTGGTATCAGCAAGGCTTCCCGTGTTATCAACATTAGTGAAGATATCTATTCAGGATTCAATTCAACCTTACGTCAAGGAAATATTACACATCATGAATATATTCAGGTTGGAAAGGGAAGAGATGTTGGGCTCAATCAGATTGCACTATTTGAAGGAAAAGTTTCTGGTGGTAACGGTGAACAAGTTCTCAGTCGTGATGTATACAGACTTGGGCAGCTTTTTGATTTCTTCCGGATGCTGTCTTTTTATTTTACAACAGTTGGGTACTACTTTTGTACCATGCTAACAGTGCTGACTGTATATGCCTTTCTATATGGGAAAGCATATTTGGCACTGTCTGGTGTTGGTGAAATCCTTGAAGAAAGGGCCAGGATAAATAAGAACACTGCACTGAGTGCTGCTTTGAATACACAATTTCTCTTTCAAATTGGTATCTTCACTGCTGTGCCAATGATCTTGGGCTTCATTCTTGAGCAAGGTTTCTTGAAGGCCATTGTCAGTTTTGTCACAATGCAATTCCAGCTTTGCACTGTCTTTTTCACATTTTCCTTGGGTACAAGAACACATTATTTTGGTCGGACAATTCTTCATGGTGGTGCAAGGTATCAAGCAACTGGCCGCGGGTTTGTTGTTCGCCATATCAAATTTTCAGAGAACTACAGACTCTACTCTCGTAGTCATTTTGTTAAAGGGTTGGAGGTTGCGCTTTTGTTGATAGTATATCTTGCTTATGGCTATAATGAAGGTGGTGCACTCTCATATATTCTTTTGAGTATAAGCAGTTGGTTTATGGCTCTATCCTGGTTGTTTGCTCCATATTTATTCAACCCATCTGGATTTGAGTGGCAAAAGGTGGTGGAAGATTTCAGAGATTGGACAAATTGGCTACTCTACCGAGGTGGAATTGGTGTTAAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGAAGAAGAACTGGCTCATATCAGGAGCTTGGGTTCAAGGATAGCAGAAACCATTCTGAGTCTTAGATTTTTCATCTTTCAATATGGTATCGTGTACAAGCTTAATGTGAAAGGAACAAGTACTTCACTGACGGTTTATGGTCTCTCATGGGTAGTTCTGGCTGTGCTTATAATTCTTTTCAAGGTATTCACCTTTAGCCAGAAGATATCGGTCAATTTCCAGCTTCTTTTGCGCTTTATACAAGGAATCTCCCTTTTAGTTGCACTGGCTGGTTTAGTTGTAGCAGTTATATTGACTGAACTGTCTTTACCGGACATATTTGCTTCTATGTTGGCTTTCATTCCTACTGGTTGGGGAATTCTGTCAATTGCTGCTGCCTGGAAGCCGGTGATGAAGAGGTTTGGACTATGGAAATCTGTTAGATCAATTGCTCGGCTCTATGATGCTGGTATGGGAATGCTCATCTTTGTACCCATTGCCTTCTTTTCGTGGTTCCCATTTGTATCAACATTCCAAACTCGCCTAATGTTTAACCAGGCTTTTAGCCGAGGGTTAGAAATTTCTCTAATTCTAGCTGGGAACAATCACAATACTGGGATATAG 5718 0.4064 MSRAEELWERLVRAALRRERTGDDAYGQPVGGIAGNVPSALAKNRDIDEILRVADEIEDDDPNISRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREAGTIDRSQDIARLQEFYKSYREKHNVDKLREEEMKLRESGAFSRDLGELERKTVKRKRVFATLKVLGTVLEQLSEEIPDELKRVMDSDSALTEDLVAYNIIPLDASSSTNAIVYFPEVQAAVSALKYFNGLPELPRGYFLQPTRNANMFDFLQCTFGFQKDNVANQHEHIVHLLANEQSRLRIPEGAEPKLDEVAVQEIFLKSLQNYIKWCDYLGIQPVWSSLEAVSKEKKLLYVSLYFLIWGEASNIRFLPECLCYIYHHMAREMDEILRQQIAQPANSCTYDSKDGVSFLDNVIFPLYDIVSAEAANNDNGKAPHSSWRNYDDFNEYFWSLRCFELSWPWRKTSSFFQKPLPRSKRMLISGSSRHQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLTILAFNDGKFNAKTLREILSLGPTFVVMKLFESVLDIFMMYGAYSTTRRLAVSRIFLRFLWFSLASVFITFLYVKALQEESKSNGNSVVFRLYVIVIGIYAGVQFFISFLMRIPACHRLTNQCGRWPLVHFVKWLRQERHYVGRGMYERSSDFIKYMLFWLVILSGKFAFAYFLQIRPLVKPTKAIIIADNINYSWHDFVSKNNHNALTVVSVWAPVVAIYLLDIYVFYTLVSAVYGFLLGARDRLGEIRSLEALHKLFEQFPGAFMDTLHVPLPNRSSHQSSVQVVENSKADAARFAPFWNEIIRNLREEDYVTNFEMELLLMPRNSGDLPLVQWPLFLLASKIFLARDIAVESKDTQDELWDRISRDDYMMYAVQECYYTIKFILTEILDDVGRKWVERIYDDINASITKRSIDGDFKLSKLAVVISRVTALMGILKETETPELERGAVRAVQDLYDVMRHDVLSINLRENYDTWSLLSKARDEGHLFEKLKWPKNTDLKMQVKRLYSLLTIKESASSIPKNLEARRRLQFFTNSLFMKMPRAKPVREMLSFSVFTPYYSEIVLYSMAELLMKNEDGISILFYLQKIYPDEWKNFLARIGRDENTLESELYDNPGDILELRFWASYRGQTLARTVRGMMYYRKALMLQTYLERTTAGDLEAAIGCDEVTNTHGFELSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAADIALLMQRNEALRVAFIDVVETLKEGKVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRPPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYSGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVSGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYFCTMLTVLTVYAFLYGKAYLALSGVGEILEERARINKNTALSAALNTQFLFQIGIFTAVPMILGFILEQGFLKAIVSFVTMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVALLLIVYLAYGYNEGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQKVVEDFRDWTNWLLYRGGIGVKGEESWEAWWEEELAHIRSLGSRIAETILSLRFFIFQYGIVYKLNVKGTSTSLTVYGLSWVVLAVLIILFKVFTFSQKISVNFQLLLRFIQGISLLVALAGLVVAVILTELSLPDIFASMLAFIPTGWGILSIAAAWKPVMKRFGLWKSVRSIARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNHNTGI* 1906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g2003 1905 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 447 IPR026899 -
Gso20g2003 1905 Gene3D - 34 192 IPR023175 -
Gso20g2003 1905 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1903 - -
Gso20g2003 1905 Pfam 1,3-beta-glucan synthase component 1028 1721 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Gso20g2003 1905 PANTHER BNAC03G35120D PROTEIN 1 1903 - -
Gso20g2003 1905 SMART FKS1_dom1_2 336 450 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g2003 Gso-Chr20 50568981 50632704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g2003 1 1905 Cell Wall Biosynthesis AT3G07160 76.702 0.0 3051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g2003 K11000 - gmx:100811473 3774.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g2003 20 50568981 50632704 Gso10g2589 10 52791504 52845961 GST