Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1977 ATGGCTGCAATAAGTTCTCTCTCTTTGTTCTTCAAACTAAAGTTTTCGTTGATTTTAATTTCATGTGTTATCGGGGTAACTTCAGCTCAGTTATCCTCAAAATTCTATGATAAAAGTTGTCCCAAAGCCCTTACCACCATTAGGAAAGAAGTGGAACGTGCTGTGCGCAATGAGAGTCGCATGGGGGCCTCCTTGCTCCGACTACACTTCCATGACTGCTTCGTTCAAGGATGTGATGCATCGGTGTTGTTAGACGACACGGCAAATTTCACTGGCGAGAAGAACTCATTTCCTAATGCTAACTCCCTTAGGGGTTTTGAAGTCATAGACAACATAAAATCTAAGTTGGAAGGCATGTGTAAAGGTGTTGTCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACAGCAAGTTTAGACGAAGCCAATTCAGATTTACCAGCTCCCTTTTTGGATCTTAGTGGCCTCATCACTGCTTTCGCCAAGAAAAATTTCACTACCCAAGAACTTGTTACTTTATCAGGTGGTCACACAATCGGACTAGTTAGATGCCGTTTCTTCAGAGCGAGGATTTACAACGAGAGCAACATAGATCCGACATTTGCACAACAAATGCAAGCATTGTGTCCCTTCGAAGGTGGTGATGACAATTTGTCTCCTTTCGATTCCACCACACCATTCAAATTTGACAATGCATTCTACAAGAACTTGGTGCAGCTAAAGGGTGTAGTACACTCGGACCAACAACTCTTCACGAACAATGGATCTGGTCCCACAAACGATCAAGTAAATAGATACAGCAGAAACATGGGAAATTTCAAGAAGGACTTTGCAGATGCAATGTTTAAGATGAGCATGCTCACCCCACTAACTGGCTCCAACGGTCAGATTAGGCAAAACTGCAGGCTAGTCAATCCACCATCAACCACTGTCTCCTGA 1002 0.4361 MAAISSLSLFFKLKFSLILISCVIGVTSAQLSSKFYDKSCPKALTTIRKEVERAVRNESRMGASLLRLHFHDCFVQGCDASVLLDDTANFTGEKNSFPNANSLRGFEVIDNIKSKLEGMCKGVVSCADILAVAARDAVVALGGQKWEVQVGRRDSTTASLDEANSDLPAPFLDLSGLITAFAKKNFTTQELVTLSGGHTIGLVRCRFFRARIYNESNIDPTFAQQMQALCPFEGGDDNLSPFDSTTPFKFDNAFYKNLVQLKGVVHSDQQLFTNNGSGPTNDQVNRYSRNMGNFKKDFADAMFKMSMLTPLTGSNGQIRQNCRLVNPPSTTVS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1977 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Gso20g1977 333 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Gso20g1977 333 SUPERFAMILY Heme-dependent peroxidases 30 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 ProSiteProfiles Plant heme peroxidase family profile. 30 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 Gene3D Peroxidase, domain 2 168 305 - -
Gso20g1977 333 PANTHER PEROXIDASE 1 330 - -
Gso20g1977 333 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 Pfam Peroxidase 48 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 Gene3D - 34 323 - -
Gso20g1977 333 PANTHER PEROXIDASE 72-RELATED 1 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 CDD secretory_peroxidase 30 325 IPR033905 GO:0004601|GO:0042744
Gso20g1977 333 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g1977 333 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1977 Gso-Chr20 50345943 50347875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1977 26 326 Peroxidase AT5G05340 56.766 5.44e-120 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1977 K00430 - gmx:100802244 647.506