Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1964 ATGGCTCTCGAGGTTGCTGTTAAGGCTGCTGTTGGGGCTCCAAATGTTCTCGGAGATTGTCCATTTTCCCAAAGGGTCCTCTTAACTTTGGAGGAGAAGAAAATTCCTTACAAACTCCACCTCATCGATCTCAGTAACAAACCCGAATGGTTTTTGGGTGTGAATCCTGAAGGGAAGGTGCCAGTGGTTCTTTTTGATGGCAAATGGGTGGCTGATTCTGATGTAATTGTGGGGATACTAGAGGAAAAGTACCCAGAACCCTCTCTAATCACTCCTCCTGAATTTGCCTCCGTGGGATCAAAGATATTTGGGTCTTTTGTGAGTTTTCTGAAGAGCAAGGATACAAACGATGGAACTGAGCAAGCATTGGTTGCTGAATTGAGTGCCTTGGATGAACATCTCAAGACCCATGGTCCATACATTGCTGGGGAGAAAGTCACTGCTGTTGATCTGAGTTTGGCACCAAAACTGTACCATCTTGTGGTAGCACTGGGCCACTTCAAGAATTGGAATATTCCAGAAAGTTTGGTACATGTGCACAATTACACTAAGCTGCTGTTCTCCCGAGAGTCATTTGAGAAAACAAAGCCTCCAAAGGAGGAATATGTTATTGCTGGATGGGCGCCTAAGGTGAATGCTTGA 642 0.4517 MALEVAVKAAVGAPNVLGDCPFSQRVLLTLEEKKIPYKLHLIDLSNKPEWFLGVNPEGKVPVVLFDGKWVADSDVIVGILEEKYPEPSLITPPEFASVGSKIFGSFVSFLKSKDTNDGTEQALVAELSALDEHLKTHGPYIAGEKVTAVDLSLAPKLYHLVVALGHFKNWNIPESLVHVHNYTKLLFSRESFEKTKPPKEEYVIAGWAPKVNA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1964 213 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Gso20g1964 213 Pfam Glutathione S-transferase, C-terminal domain 119 182 - -
Gso20g1964 213 CDD GST_C_DHAR 89 210 - -
Gso20g1964 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Gso20g1964 213 SUPERFAMILY GST C-terminal domain-like 83 204 IPR036282 -
Gso20g1964 213 CDD GST_N_family 20 77 - -
Gso20g1964 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Gso20g1964 213 SFLD Main (cytGST) 19 186 - -
Gso20g1964 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 2 209 IPR044627 GO:0033355|GO:0045174|GO:0098869
Gso20g1964 213 PANTHER DEHYDROASCORBATE REDUCTASE 2 209 - -
Gso20g1964 213 SFLD Glutathione Transferase (cytosolic) 19 186 IPR040079 -
Gso20g1964 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 213 IPR010987 -
Gso20g1964 213 Gene3D - 90 213 - -
Gso20g1964 213 Gene3D Glutaredoxin 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1964 Gso-Chr20 50236473 50239661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1964 1 213 Glutathione S-transferase Gene Family AT1G75270 77.570 6.43e-121 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1964 K21888 - gmx:100306061 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1964 20 50236473 50239661 Gso10g2555 10 52498060 52501258 GST