Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1956 ATGGAGATCCAGAAAAAACGTTTCAAGGGAAGCTTCCTTAGCTTCTTTGACTGGAATGGCAAATCACAAAAGAAGCTGCTTTGTGACAGGCCTAACTTACCTGATGTTTCAAAGCAAGGGAAGGAAAACATGGACAGCATGCCAAAGTCACAGGACAATAGGATAAAAATGGATAACAATAGAGTAAATCCTAGCAATAATGCAAGTTGTGATATTGATTGTGCCATATCAATTAATAGTGATGAAGGGTGTGGGGCTAAAGTCCCAGGGTTAGTAGCCAGACTTATGGGTTTGGATTCATTGCCAGTTTCAACTGTCTCTGGGCTCTCCTCCTCATCCACTTCATTATATGGCTCCAACTCTCTTGGATCTTCTCATTCTCCTGACGATGATGTTCTTCACTCAATGGTTGACTGCTGTTGCCCTGTGGATCCCATAAATATGCGACTCAAGCCAGAGAAATCTTCTTGGGCTGCCATGCAATCAAGGGCTCAGAAAGTGGGAAACCCGGCCATGAAGAGATTTCAGACTGAAATGTTGCCTCCAAAGTCTGTTAAACCCATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAGCCCTGGTTATACGCAACCTAAGCATGCAGCTCATGTAATGGAGGCAGCTGCCAAAATAATTGAGGCAAGTTCCCAGCCATGTAGGAGGAATAGAATGTCTTCATCTGGATCTTCATCTGGATCTTCATCTGTTCCCTTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTGCACAATATGAATTCAAATTCATGGATATGCACACTGCTAACCCTCTGAATGGCAAACCTAGTGAGAGGAGAAACAATTTATATAAATCCTCTTCAAGTTTCAAAGGTTCAAGGGATTCAGTAAAGAACAGTTCTTGTCAGTTGGCAAGCAAAGGAAAATCTGCTTCCCTTGCAATGCCATCTAAAACCAATGCTCAGAGCCGTGATGAATTGACTTTGAATGGTAATAGGAGATATATGAGGCAGAACAAACAGAATGATGTAAAATCAAACAAGTTTCCCAGGAGCCAGAAGAAACAAATTGTAGACCGGGCCAGGGTCATGCAGCAGAGAGCTTGTACAGGCCAGAGTAGCAATGTGCTTGGGAAGAATAACCAAAAGCAGAATAGTGTAACCAACAAAGGTGGTTCAGCTTCAAAAGTGGACTCCAATAAGCCAACACAAACTTGGTCTTCAGAAAGTTCTACCGGCGCCAAGAAGACTACAAAAAAGGTTGTTGTAAATGCCAACATTGAGCCCAAAAGGTTTGGCACAAGGATCACTGATACCATAAAGGAGTTTCCTGTTTCCAAAAGGAAGGGTATTTTCCAAAAGAAAAACTATAGTAGTAGCGATGTTCACAATGAGGCAAGAGGTTCTAATAGTGCAGCTAATACTTATGAAAACAAGTCCGTAAAATGCAATATTACAACTGATAGAAGTATTGACCAGGATGCATTTAGCATGAAAGGGAGCAATGGTGTGATTTCATTTACATTTACATCTCCCTTGAGAAGAAACATGCCCGAGTTGCAGTCCTCTACTGAGCAAGTGATGGGAACAAGGAACGAAATTGAGGTCAATTCTTGTAATAGTGATAAGCTTTATCCCCAAAAGTCATCATTTTCTCCTCCCAGGTTACATGTAATAGATGGTGATGCTTTAAGTGTTCTTTTGGAGAAAAAGCTGCAAGAATTGACATCTAGAATTAACCCACCTCAGTGCTCCCTCACGACAGAAGGGTCTTCTACTGGTTTAAGATCTAGTTTGGAAGACAAATGTCAAAGTGTGTTAAGCACCACAGTAAGGGAACAAGACAGAATCTTTCGCAATAAATTGGACAGCATGCATGATAATTGTTCTTCAAGTGATATTATGATGCTTAGCATGAATCAGCAACTGCAGACATCAGAATCAATGGAAGAGCCTAGCTGTAGCAGCAACAGTGAAAGCCAAAATGGAAGTTACTTACATAGTGCATATGGCAGCACAATTTATTCTTCCATGCAAGATGAGGAGGTATCTAATTTTTCTCCAATGAATGAATCTCTGTCACTCGAAAACAAAGCAGAATGGTCTGAGCAAAGCTCTTCCATAGTGATGGGGGATAACATGGCCAGTGAGCAGTTAAGTTTAATGTCAAATTCGGCCGAATATACAAGATCAGCAAGGAACATGGAGCTTGAATATGTAAAGGATATATTCAGCAATGCAGAGTTGATGGCAGAAGAATTTGTGGTGGGTGAAACAGACAAGATCATAATGGAAAATCTCTTTGATAAGTTGGAGAATGAAGGCCTTGGGGCAGAAAACTATGAAGAGTACTCTAAGATTGAGAGGAAGATTATATTTGACACTGTGAGCGAGTGCCTTGAATTAAGATGTAAACAAGTTTTTGTTGGAAGCTGCAAAGCATGGCCTAAATGGGTGGCTTCAGTTCAGAGGAAGAAGTGTTTAGCAGAAGAGTTTTACAAGGAAATGCTGAGCTTTAGAAATATGGAAGATGGGGTAGAGGTGGATGAACTTGTCAGCAAGGACATGAGCACTGGATGGGGTAGATGGCTTGACTTTGACATTGAAGCCTGTGAGGAGGGTTCAGAACTTGAATTTGATATTGTAACATGTTTGATTAACGAATTGGTTTCTGATTTGTTGTACGTTTAA 2697 0.4079 MEIQKKRFKGSFLSFFDWNGKSQKKLLCDRPNLPDVSKQGKENMDSMPKSQDNRIKMDNNRVNPSNNASCDIDCAISINSDEGCGAKVPGLVARLMGLDSLPVSTVSGLSSSSTSLYGSNSLGSSHSPDDDVLHSMVDCCCPVDPINMRLKPEKSSWAAMQSRAQKVGNPAMKRFQTEMLPPKSVKPIPVTHNKLLSPIKSPGYTQPKHAAHVMEAAAKIIEASSQPCRRNRMSSSGSSSGSSSVPLRILDLKEKLEAAQYEFKFMDMHTANPLNGKPSERRNNLYKSSSSFKGSRDSVKNSSCQLASKGKSASLAMPSKTNAQSRDELTLNGNRRYMRQNKQNDVKSNKFPRSQKKQIVDRARVMQQRACTGQSSNVLGKNNQKQNSVTNKGGSASKVDSNKPTQTWSSESSTGAKKTTKKVVVNANIEPKRFGTRITDTIKEFPVSKRKGIFQKKNYSSSDVHNEARGSNSAANTYENKSVKCNITTDRSIDQDAFSMKGSNGVISFTFTSPLRRNMPELQSSTEQVMGTRNEIEVNSCNSDKLYPQKSSFSPPRLHVIDGDALSVLLEKKLQELTSRINPPQCSLTTEGSSTGLRSSLEDKCQSVLSTTVREQDRIFRNKLDSMHDNCSSSDIMMLSMNQQLQTSESMEEPSCSSNSESQNGSYLHSAYGSTIYSSMQDEEVSNFSPMNESLSLENKAEWSEQSSSIVMGDNMASEQLSLMSNSAEYTRSARNMELEYVKDIFSNAELMAEEFVVGETDKIIMENLFDKLENEGLGAENYEEYSKIERKIIFDTVSECLELRCKQVFVGSCKAWPKWVASVQRKKCLAEEFYKEMLSFRNMEDGVEVDELVSKDMSTGWGRWLDFDIEACEEGSELEFDIVTCLINELVSDLLYV* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1956 898 MobiDBLite consensus disorder prediction 30 62 - -
Gso20g1956 898 MobiDBLite consensus disorder prediction 644 664 - -
Gso20g1956 898 PANTHER DUF4378 DOMAIN PROTEIN 1 898 - -
Gso20g1956 898 Pfam DUF761-associated sequence motif 80 107 IPR032795 -
Gso20g1956 898 MobiDBLite consensus disorder prediction 271 420 - -
Gso20g1956 898 MobiDBLite consensus disorder prediction 276 348 - -
Gso20g1956 898 Pfam Domain of unknown function (DUF4378) 738 890 IPR025486 -
Gso20g1956 898 MobiDBLite consensus disorder prediction 349 363 - -
Gso20g1956 898 MobiDBLite consensus disorder prediction 227 245 - -
Gso20g1956 898 MobiDBLite consensus disorder prediction 225 245 - -
Gso20g1956 898 MobiDBLite consensus disorder prediction 368 420 - -
Gso20g1956 898 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1956 Gso-Chr20 50163379 50167944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1956 3 896 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.711 4.34e-85 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1956 - - gmx:100797988 1685.23