Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1944 ATGGGGCATTTTTCATCTGCGTTCAATAGGTTGGCAAAGTCATTCACAACGAAGAAAGGAAGGAGTTCTGATGAATGTAATGGAAGAGAAGCCGCGGAAACAATGGCAAAGGAAGCCAAAAGAAATCACTTCATGTTGCATAGCTCTGGCACAGTTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAGAAAAGGCCAGAAAGGAGTTAATCAGGATTGCTGCATTGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGCGGGATTTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTACGAAAGTCAATGCCGCCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTCCACTTCATTCAGATGTTGATTTTGATATAGAGACAGAGAAAAAGCAACACCGGTTTAACTTGTGGAAGCATTCATACTTGAAGACTTGTGCTGCCATTGATCGCGAACTAGAGCAGAATCGCAAGATAGATTCATTTTACAGTGGAACAACTGCCTTGTCAATTGTTAGACAGGGTGAACTCATTATCATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAATAGATTTCAAGCCCAATTTACCTCAAGAGGCAGAGCGAATACTTGAGTCCCAAGGACGAGTTTTCTGCTTAGACGACGAGCCTGGGGTGCATAGGGTGTGGTTGCCGGATGAGGAGTTTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAAAGTATGGTCTTATTTCAGTGCCTGAGGTAACACACAGGAATATAACCACCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCCAATCAAGAAGCAGTGGATATTGTGTCTTCAACACCAGACAGAACAGACTCGTCTAAACGTTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGCGAGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCTTCACTTGACCAAGTTGCCACCCCAGAATAG 1104 0.4493 MGHFSSAFNRLAKSFTTKKGRSSDECNGREAAETMAKEAKRNHFMLHSSGTVNVDGSNNFASVFSRKGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKSMPPSLLCNWQETLSQTPLHSDVDFDIETEKKQHRFNLWKHSYLKTCAAIDRELEQNRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAERILESQGRVFCLDDEPGVHRVWLPDEEFPGLAMSRAFGDYCVKKYGLISVPEVTHRNITTKDQFVVLATDGVWDVISNQEAVDIVSSTPDRTDSSKRLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLDQVATPE* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1944 367 SMART PP2C_4 51 352 IPR001932 -
Gso20g1944 367 Gene3D - 50 356 IPR036457 -
Gso20g1944 367 CDD PP2Cc 59 354 IPR001932 -
Gso20g1944 367 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 363 - -
Gso20g1944 367 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Gso20g1944 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 363 - -
Gso20g1944 367 Pfam Protein phosphatase 2C 84 328 IPR001932 -
Gso20g1944 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1944 Gso-Chr20 50062252 50066013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1944 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.308 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1944 - - gmx:100793051 751.51