Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1934 ATGAGTCGAGGAAGTGCAACTGCTGCGAAGGGCAAGAAGAAGGGTGCGACATTCACCATTGACTGCGCCAAGCCAGTGGAGGACAAGATCATGGACATCGCGTCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGCCGGTGCTCTCGCCGACACCATCACCGTCACACGTGAGAAGACCAAAATCATAGTTACTTCAGACAGCAACTTCTCCAAACGGTATCTCAAGTACTTGACTAAGAAGTACTTGAAGAAGCACAATGTGCGGGACTGGCTCAGAGTGATTGCTTCTAACAAAGATAGAAGCATTTATGAATTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 375 0.4693 MSRGSATAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALADTITVTREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1934 124 Gene3D - 5 124 IPR038526 -
Gso20g1934 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gso20g1934 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Gso20g1934 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1934 Gso-Chr20 49975710 49977078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1934 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.871 1.47e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1934 K02891 - gmx:100790071 227.254