Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1926 ATGGGTTGTGGTTCTGAGCATTTTATCATGATCTTCAACATCACCCTCTTGATGCTTCTATCATCACAAAGCACCCACATTTTGACTGTGGCTGGTTCTCTATTCAATGCAGTGGGAAGCTTCCAAGTTCATGGCCTACCCGAGATGTATTTCATTGAAGAGAATGATGAAAAGCAAGTTAAGAAAATCTCAGGAATAGATGAGAATGAAGAGAAGCAAGCTTTGATACTGGAAAAGTTTAGATCCTTGCTTGGACTCAAGAGCTTCCACACCAAAGTTCCATTCAATGGTGATTTGGAGTTTCTCTCTCCTTCACCTTCTCCATCACCTATCATTGAAGAAACTCAGGCTCCTTCTCCTTCTCCTCTTCCACACGTGCCCCATCATTCCCATCACCATCCACCACATCATAAGAATCTACCACTTCACCAAACTCATCATGAAGATAGAGGCAGGGCTAAGAGAATACTAATAGCTGTTCTTGTATCTGCTGGGGTTGCTACATTGCTTGGTGCTTGTGGCTTATTCTGGGTGTGGAGAAAATTCTCAAATCACACAAAGAAACCCAAAAGAACAATGCCACTATATAATAGCAAGAGCAAAGGAAGTGGAGGTGGTTATCAAAGTTCATCAAGCAAGGTGAGTTTAAACTCAGGACTAGATCTCTTTTATCTTAATGCCTTAGGCGAGGACATAGAGCAACACTCTTGCAGCTTGAAAAAGACTCGCAAGGATGGTTTAGAATATGATAATGTTAGTGGTTCTTCCGCGAAGGAAATAGCATCTGTTCATGAAGATGCAGAATCAGTGGAAGGTGAACTTGAATCTGGTGGAGGCAACTCTTCTTCTGGGGATAAAATTATCCCTGAAGATTGCCATTCATCAGACAATGAAAGTTTTCATTCCTTTGTTAATGATTCACACTCCAATGCCTCAGCTTGTAGTCTTAGTGACAAAAACTCTCTGTCCCGTCAAAATTCAACTTCTTTACCAAACCAATTTCCTAGTTCTCCACATAACTCAATGTCAAATATACAACTTCACCATTCACCAAATATTCCAAAAACATTCACTTCCCCTCCGCCTCCTCCTCCACCACCACCGCCTCCACCATTGCGAATGCCATTATTTTCTTTGCATTCCCTTACTTCTTCATCTAGACTCTCCTCTCATTCCCCACTTTCTTTGACATCTAATAATTTATCATCTCCGGTAAATTCAGACACTTCTTCTGGTTCAAATCAAAGTCCAGAAAAGGAGTTGCCTTCTCCACATGGACCTTACCCTACACAATCTCCTCCCAACATTCCCCCACCACCATGTCCACCTCCATTTCTTAAAGGCAATAGTGCCAAAACCCCACCTCCTCCACCTTCTCAACTCCCTCAATTTACCCCTCTTGGTAAAGATGGTGCACCATTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAACCGCACAATGGTTTGGGACAAGCTAAGATCAAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCTCTATTTGGTTACAATTTGCAAAATTCAATTAAGAATGACGAAACAAAGAGTAAAACACCGTCTCCAGGCAAGCATGTACTTGAGCCAAAACGCCTGCAGAACATAACTATACTCTCGAAAGCTCTGAATGCGACAGCTGAGCATGTCTGCGAGGCCTTAATGCAAGGGAAGGGGTTGTCGTTGCCCCAACTAGAGGCACTAGTGAAAATGGTACCCACCAAGGAAGAAGAGTCCAAGCTCTTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGAGGGCAATGCTCGATGTGCCATTTGCCTTTCAAAGAGTAGAAGGCATGCTTTTCAGAGAGACATTTGACGATGAAGTAGTTCACCTCAAGAACTCATTTTCAATGCTTGAGGAAGCATGCAAGGAACTAAGATCAAGCAGGCTCTTCTTGAAGTTACTAGAAGCAGTGCTCAAAACGGGAAACCGAATGAACGTTGGAACAATCAGAGGAGGTGCTAGAGCATTTAAACTTGATGCACTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGTAAAACCACGTTGCTCCATTTTGTTGTTCAGGAGATTGTTCGTTCGGAAGGAATAAGAGTTTCAGATAGCATTATGGGGAAAATCAGCCAAAGAAGTAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTACAAAAGGATGGGATTAGAACTTGTTTCTGGTCTCAGCACTGAGTTATACAACGTGAAAAAAACAGCCACCATTGACTTGGACGTTCTTGCAAGCTCTGTGTCAACCCTATCAGAAGGAATGAAAAAGCTGCAACATCTAGTGGAGAAGGAGTTGCTTAAAAATGAAAGGAGCATGAACTTTGTGCAGTGTATGAAGTCATTCCTTAACTATGCTGATGGAAACTTGAAGGAGTTGCGAGGAGATGAGGATAGAGTGTTGGCACGTGTGAAAGAAATTACGGAGTATTTTCATGGGGATGTGAGCAAAGAAGATGGAAACCCTCTTAGGATATTTGTGATTGTGAGAGATTTTCTGGGGATGTTAGATAATGTGTGTAAAGAACTTAGAAGGTCTAAAGCTCCACGTAGCCCGAACCCTCTTGCTATGCTCCCTTTAGATAGATCATAG 2679 0.4252 MGCGSEHFIMIFNITLLMLLSSQSTHILTVAGSLFNAVGSFQVHGLPEMYFIEENDEKQVKKISGIDENEEKQALILEKFRSLLGLKSFHTKVPFNGDLEFLSPSPSPSPIIEETQAPSPSPLPHVPHHSHHHPPHHKNLPLHQTHHEDRGRAKRILIAVLVSAGVATLLGACGLFWVWRKFSNHTKKPKRTMPLYNSKSKGSGGGYQSSSSKVSLNSGLDLFYLNALGEDIEQHSCSLKKTRKDGLEYDNVSGSSAKEIASVHEDAESVEGELESGGGNSSSGDKIIPEDCHSSDNESFHSFVNDSHSNASACSLSDKNSLSRQNSTSLPNQFPSSPHNSMSNIQLHHSPNIPKTFTSPPPPPPPPPPPPLRMPLFSLHSLTSSSRLSSHSPLSLTSNNLSSPVNSDTSSGSNQSPEKELPSPHGPYPTQSPPNIPPPPCPPPFLKGNSAKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKSKTPSPGKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPFAFQRVEGMLFRETFDDEVVHLKNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSTLSEGMKKLQHLVEKELLKNERSMNFVQCMKSFLNYADGNLKELRGDEDRVLARVKEITEYFHGDVSKEDGNPLRIFVIVRDFLGMLDNVCKELRRSKAPRSPNPLAMLPLDRS* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1926 892 PANTHER FORMIN-RELATED 56 886 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso20g1926 892 SMART it6_source 467 880 IPR015425 -
Gso20g1926 892 MobiDBLite consensus disorder prediction 106 148 - -
Gso20g1926 892 MobiDBLite consensus disorder prediction 298 354 - -
Gso20g1926 892 Pfam Formin Homology 2 Domain 471 865 IPR015425 -
Gso20g1926 892 MobiDBLite consensus disorder prediction 422 463 - -
Gso20g1926 892 MobiDBLite consensus disorder prediction 378 420 - -
Gso20g1926 892 MobiDBLite consensus disorder prediction 111 125 - -
Gso20g1926 892 SUPERFAMILY Formin homology 2 domain (FH2 domain) 480 876 - -
Gso20g1926 892 MobiDBLite consensus disorder prediction 195 211 - -
Gso20g1926 892 MobiDBLite consensus disorder prediction 189 211 - -
Gso20g1926 892 Gene3D Formin, FH2 domain 490 881 IPR042201 -
Gso20g1926 892 MobiDBLite consensus disorder prediction 126 140 - -
Gso20g1926 892 MobiDBLite consensus disorder prediction 355 375 - -
Gso20g1926 892 PANTHER FORMIN-LIKE PROTEIN 56 886 - -
Gso20g1926 892 MobiDBLite consensus disorder prediction 260 478 - -
Gso20g1926 892 ProSiteProfiles Formin homology-2 (FH2) domain profile. 467 891 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1926 Gso-Chr20 49906867 49910827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1926 142 885 FH2 protein (formin) Gene Family AT3G05470 53.797 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1926 - - gmx:100793761 1560.43