Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1909 ATGAACGATCAATCCATGCAAATCCAAATGCTCGCTGAAAAATTCCACCGATTTGTTCTTGACTGCGAACTCAAGCAACCGTCAATCGCTCAGTGCTCTGATATTGTGTCAAAGCAAGTGAACGAGAACTCTGACTCCATGGATGAACATAGTTTGTCCAATGGAACCCATGAAGTTTCTCCGGATAAGGGTCACACACTTCCCATATTGAAGAAAATACTTGATCTCGGTGCTAAAATTCAGGATTTGAAGAAGCAGCATATAACCTTGTGTGATGAAGTGAAACTCACTTCTGAGTCTTTTCCTGGCAATGATATTTTGAAGTCTGTACAGCTTCTGGGTGCTGAATACGAACTCTTAAAAAGAAAGTACTCAGAGGAGTCCTCTGAACGGAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGAAATATCAGGGTTTTCTGCAGATGCAGGCCATTAAATGAGAATGAAATTGCTAATGGGTCTGTATCTGTTGTCAATTTTGAGTCGTCTTCAGATAATGAGCTACAAGTCATTTGCGCAGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTGTTTGGGCCAGAAGATAACCAAGAGACTGTTTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGGTACAATGTCTGCATATTTGCCTATGGGCAAACTGGAACTGGGAAAACATTTACAATGGAAGGGACACCAGAACACAGGGGAGTTAACTACAGAACCCTGGAAGAATTATTCCGGATAACTGAAGAGAGACATGGTACAATGAAGTATGAATTGTCTGTTAGCATGCTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCTACCCAACCCACTAAGAAATTGGAGATAAAGCAAGCTGCCGAAGGAACCCAAGAGGTCCCAGGACTTGTTGAAGCTCGTGTTTATGGAACAGAAGATGTGTGGGAAATGCTTAAGACTGGAAACCGAGTCAGATCAGTTGGATCCACCTGTGCTAATGAACTTAGCAGCCGTTCTCATTGCTTGTTAAGAGTAACTGTAATGGGGGAAAATTTAATCAATGGCCAGAGAACAAAGAGCCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTGGGGAAAACTGAAGCTGAAGGAGAAAGGCTGAAGGAATCTCAATTCATAAATAAGTCACTTTCAGCACTTGGTGATGTTATTTCCGCCCTTGCTTCCAAATCATCCCACATCCCTTACAGGAACTCAAAACTCACTCATATTCTGCAAAGCTCTTTAGGAGGAGACTGCAAAACTTTAATGTTTGTGCAAGTGAGTCCAAGTTCAGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCCACCCGTGTCCGTGGGATCGAGAGTGGCCCAGCTCGCAAGCAAGTAGACCACACTGAGCTGTTTAAGTACAAGCAAATGGCTGAAAAGCTCAAACAAGATGAGAAGGAAACAAAGAAATTACAGGATAGTTTGCAAATCATGCAACTCAGGCTTGCAGCAAGAGAACATCATTGTAGAAGCCTTCAGGAAAAGGTTCGGGACCTCGAGAACCAGATTGCAGAAGAAAGGAAAACCAGACTAAAGCAAGAAAGTAGATCTCTTGCTGCCGTTACAGTTCAACCCTCATCATCAACAGTTCATAAAACCATGACAGACAAGAAGCCTCCACTGAATCCTTCAAAACTGAGATTGCCACTGAGAAGAATAACCAATTCCTTGCCTCCACGGTCTCCTCTTAGATCAAAGAGTTACACTGCCTTCATGAGTGGAAAGGAAAACTCTGTCAGAAGGAACTCAATGGCGACAAATGCTGTTAGGCCAGCTTCACCATCAACAACAGCACAGTTCCTTCAGGCAAGGAGGCGGGTGTCCGTTGCTGTGAGACCCCCTGCACCATCAACAACGCAGGTCTTTCAGCCAAGAAGGAGGGTCTCCATTGCCACACTACCTTCTCACACAATTTCTGACATTACTACTCCACTCCGTACCTCAGCATTACGTGTTACCGGTGGAAGCAGCCAACAATCACGGATAAGAAGCCAAAGGAAAGATCGGTATTCAAGTTTGTTCGCCCCATTGCCAGAGTTGAGAACATCAGTTGAGACAACTCCAATGACTGTAAGGAGGAGCAGCAAGTTTATGATGAGCAGTCCGGTAAGGGCAGATTCCAGGGAGGGATCCGCTAGGCATCCAACTCTTCTTGCACTTCAACGCAAGCCTGTAGTCTGGAGTCCTCTTAGAGGTTTGAAAAGTAACAGAAAGTCATCACTGTTGCCATATCGCCCAACCTAA 2337 0.4399 MNDQSMQIQMLAEKFHRFVLDCELKQPSIAQCSDIVSKQVNENSDSMDEHSLSNGTHEVSPDKGHTLPILKKILDLGAKIQDLKKQHITLCDEVKLTSESFPGNDILKSVQLLGAEYELLKRKYSEESSERRRLYNEVIELKGNIRVFCRCRPLNENEIANGSVSVVNFESSSDNELQVICADSSKKQFKFDHVFGPEDNQETVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITEERHGTMKYELSVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAAEGTQEVPGLVEARVYGTEDVWEMLKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSSHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSSADLGETLCSLNFATRVRGIESGPARKQVDHTELFKYKQMAEKLKQDEKETKKLQDSLQIMQLRLAAREHHCRSLQEKVRDLENQIAEERKTRLKQESRSLAAVTVQPSSSTVHKTMTDKKPPLNPSKLRLPLRRITNSLPPRSPLRSKSYTAFMSGKENSVRRNSMATNAVRPASPSTTAQFLQARRRVSVAVRPPAPSTTQVFQPRRRVSIATLPSHTISDITTPLRTSALRVTGGSSQQSRIRSQRKDRYSSLFAPLPELRTSVETTPMTVRRSSKFMMSSPVRADSREGSARHPTLLALQRKPVVWSPLRGLKSNRKSSLLPYRPT* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1909 778 CDD KISc_C_terminal 142 469 - -
Gso20g1909 778 SMART kinesin_4 142 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1909 778 ProSitePatterns Kinesin motor domain signature. 368 379 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso20g1909 778 Coils Coil 485 547 - -
Gso20g1909 778 PANTHER KINESIN-RELATED 80 772 IPR027640 GO:0003777|GO:0007018
Gso20g1909 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 504 IPR027417 -
Gso20g1909 778 PANTHER KINESIN-LIKE PROTEIN KIN-14S 80 772 - -
Gso20g1909 778 MobiDBLite consensus disorder prediction 546 566 - -
Gso20g1909 778 Pfam Kinesin motor domain 150 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1909 778 ProSiteProfiles Kinesin motor domain profile. 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1909 778 MobiDBLite consensus disorder prediction 546 576 - -
Gso20g1909 778 Gene3D Kinesin motor domain 139 511 IPR036961 -
Gso20g1909 778 Coils Coil 117 137 - -
Gso20g1909 778 MobiDBLite consensus disorder prediction 607 626 - -
Gso20g1909 778 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1909 778 PRINTS Kinesin heavy chain signature 338 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1909 778 PRINTS Kinesin heavy chain signature 369 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1909 778 PRINTS Kinesin heavy chain signature 418 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1909 Gso-Chr20 49745073 49749350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1909 110 512 Calmodulin-binding Proteins AT5G65930 40.338 2.57e-81 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1909 K10406 - gmx:100788477 1487.63