Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1892 ATGGAGGTTAATACTACAACCACTGTACCTGCAGGTCCACCAACTAGGAACCATTCTTACACACCACACCACTTACATTCAGAAAGACATAGACATAGCCATGGCCATTTCCCCTCCAAAACCATTCTCATAATCATCGCATTGGTCACCTTAGTTACGGTCCTATTTATCATTTTTGTTGTTTTATTCTTGATCCATCGCCAGAAATCCTTCAGCAAGAATGGAACTTGCGAAGAAGACAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATTACTTCAACAACGTTGAATTCTAGCCCAGATGCGAAAAGTGGGTGTCTCAATGGGGGAAATTTGAGCAGGACCCCAGCACCTAAATTTAGAGGAGTACAAGTGTTCACCTATAGGGAATTAGAAATTGCCACGGATGGATTCAGCGAAGCAAATGTGATTGGTAGTAATGGAATTGGAGGGCATGGTTTGATGTACAGAGGTGTTCTAAGTGATGGCACTATGGCAGCAATTAAGTTGCTTCACACTGAGGGTAAGCAAGGGGAGCGTGCCTTCAGAATAGCGGTCGATCTCCTGAGTCGCTTGCACTCTCCTCATTCGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTATTGATTTTTGAATACATGCCCAATGGAACCCTCCACTACCATCTTCACACCCTCAACGATCAAACTCGGCCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCACTGGAATTCTTGCATGAACATGCAGTCTCTCCTGTGATCCACAGAGACTTCAAGAGTAACAACGTTCTACTGGATCAAAACTTGCGTGCCAAGGTGTCTGATTTTGGATTGCCTAAGATGGGATCAGACAAGAGGAACGGTCAGGTTTCCACCCGTATGTTGGGGACCACTGGATATTTGGCACCAGAGTACGCCATGGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTTGAACTGCTCACGGGACGTGTGCCAGTTGATATCAAGCGGGCCCCAGGAGAACACGTCCTTGTCTCTTGGGCTCTCCCAAGGTTGACAAACAGAGAAAAGGTGATTGAAATGGTTGACCCAGCTCTACGTGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCACTTGTTAGGAACCAATCCTCTCTTAGTTCATCTAGCTCCCTACGATTTCAGAAACAAACGCCAAGTCCAAGTCATTAG 1326 0.4638 MEVNTTTTVPAGPPTRNHSYTPHHLHSERHRHSHGHFPSKTILIIIALVTLVTVLFIIFVVLFLIHRQKSFSKNGTCEEDSRELHDTSSRLITSTTLNSSPDAKSGCLNGGNLSRTPAPKFRGVQVFTYRELEIATDGFSEANVIGSNGIGGHGLMYRGVLSDGTMAAIKLLHTEGKQGERAFRIAVDLLSRLHSPHSVELLGYCADQHHRLLIFEYMPNGTLHYHLHTLNDQTRPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNLRAKVSDFGLPKMGSDKRNGQVSTRMLGTTGYLAPEYAMGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVIEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNQSSLSSSSSLRFQKQTPSPSH* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1892 441 SUPERFAMILY Protein kinase-like (PK-like) 121 414 IPR011009 -
Gso20g1892 441 MobiDBLite consensus disorder prediction 75 111 - -
Gso20g1892 441 MobiDBLite consensus disorder prediction 88 111 - -
Gso20g1892 441 MobiDBLite consensus disorder prediction 1 15 - -
Gso20g1892 441 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 2 440 - -
Gso20g1892 441 PANTHER OS01G0750732 PROTEIN 2 440 - -
Gso20g1892 441 ProSiteProfiles Protein kinase domain profile. 142 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1892 441 Gene3D Transferase(Phosphotransferase) domain 1 218 435 - -
Gso20g1892 441 Gene3D Phosphorylase Kinase; domain 1 112 217 - -
Gso20g1892 441 Pfam Protein tyrosine and serine/threonine kinase 151 414 IPR001245 GO:0004672|GO:0006468
Gso20g1892 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Gso20g1892 441 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1892 Gso-Chr20 49629254 49632780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1892 107 439 Receptor kinase-like Gene Family AT3G58690 59.824 2.83e-143 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso20g1892 PK_Tyr_Ser-Thr 5.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1892 - - gmx:100499645 827.394