Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1874 ATGGTAATGAAAATGCCTGTTCCTAACGGAGAAGAGCAGGTTCTGTTACCTGAAAATGCAAGTGAGGTTTCAGAGTCACCCTCATTGAATTTGAACCCAGATTCAGTTGATGGGTCCCCACCTGTTTCCACCGTTTACACTGACGTGGGTGTCGTGCCAGAACACCAAAAGAACGAGCTTGAGCACTTGATATCCAATTTAGAAGGAGAAATCGAGGAACTGAGGCTCAAGCAAAAGAAATTGGATAAAAAGCGGAGAGAAGCATTGAGCAAGATATTGGACATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCGAATCTGGTTACGGAGAAGAGAAAAATTTCCGAACCGGTATCGGCTGGACCAGAGAAAATTCAGGTTAAGTTCGGGGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTAACCAAGAAGCAAGCCAAGAAAGTGTTTTCGTTGATGTTGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGTGTTTTTGCTTACGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGAACAAACAAGGAGCCAGGAATAATTCCGCGTGCTCTTGAAGAGCTCTTTCGTCAAGCCTCTTTGGATAATTCATCTTCTTTTACCTTTACAATGAGCATGTTGGAAGTTTATATGGGCAATCTCAGGGATTTGTTATCTCCAAGACCATCCGGTAGACCACATGAACAATATATGACAAAGTGCAATCTCAATATTCAAACAGATCCAAAGGGATTGATTGAAATTGAGGGTCTCTCAGAAGTGCAAATAAGTGATTATGCTAAAGCCAAATGGTGGTACAACAAGGGCAAACGGTTTAGATCGACCTCATGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACGAGGATAAGCATATTTCGACACGGGGATGCTTTGGAAGTCAAAAGTGAAGTAAGTAAATTGTGGATGATTGATCTTGGAGGGAGCGAACGGTTGCTTAAAACTGGAGCCAAAGGACTAACACTTGATGAGGGCAGAGCCATTAATCTTTCCCTTTCAGCTTTAGCTGATGTTGTTGCAGCTTTGAAGAGGAAGAGGTGTCATGTGCCTTACAGGAATAGCAAGCTGACTCAAATACTGAAAGATTCTCTTGGGTATGGCTCAAAGGTATTGATGTTGGTGCATATAAGCCCTTCCGAAGAAGATGTTTGCGAAACAGTTTGTTCCTTGAACTTTGCAAAGAGAGCGAGAGCAATAGAGTCCAACAAAGAAGTGCCAGTGGAAGTGAAGAAGCAAAGGGAGAAGAAGATTATGGAACTAGAGGAAGACATCAAGGAAGCCGTAAAACAGCGCCAGAATTTAAGGGAACAAATACAGAAGATTGAGTTGAAGTTAAATGAGTGTAAAAAGCTCGCATCAACCACATATAGTGTTGTGGAAAGTGATGACATTGCAACCTCAACTAGCCTCAAAGATGATGTCAAAGAGGTCATTGAAACCCCTAAAACATCCAAGAAGTCCATTAAAAGAAATTTCTCCAATTCAACGCCTCGATTCATGACTTCAACTGTTGCAAGTCGCCAAAGGCAAAGTGCTGCAGAACGAGACATTAGTACTGTGAGATTGAAAAGTTTTAGATCTATTATCTCTAAAAGTTCCAATAATTATTCATATTCCCAATCAATGAGTTACTCAGATATCCGCATCAAAGCAATACTACGAAGTTCAAATGGAAAATCTCGGTATGCTGAAGCAGATAGTGTTCCAATTCCAAACACTGTTCTCACAGAAAAGCCTAAATGCAATGATATGGAATCAAAAGTGACTACTCCTCGAAGCAAGATGGTTACATCATCAGACCAAAACTTTAGAGTTTCATTGGGTCGTCACAGGAGAAGGATGTCTGATCTGATCTAA 1932 0.413 MVMKMPVPNGEEQVLLPENASEVSESPSLNLNPDSVDGSPPVSTVYTDVGVVPEHQKNELEHLISNLEGEIEELRLKQKKLDKKRREALSKILDIKGSIRVFCRIRPNLVTEKRKISEPVSAGPEKIQVKFGGTRKDFEFDKVFNQEASQESVFVDVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNKEPGIIPRALEELFRQASLDNSSSFTFTMSMLEVYMGNLRDLLSPRPSGRPHEQYMTKCNLNIQTDPKGLIEIEGLSEVQISDYAKAKWWYNKGKRFRSTSWTNVNEASSRSHCLTRISIFRHGDALEVKSEVSKLWMIDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVVAALKRKRCHVPYRNSKLTQILKDSLGYGSKVLMLVHISPSEEDVCETVCSLNFAKRARAIESNKEVPVEVKKQREKKIMELEEDIKEAVKQRQNLREQIQKIELKLNECKKLASTTYSVVESDDIATSTSLKDDVKEVIETPKTSKKSIKRNFSNSTPRFMTSTVASRQRQSAAERDISTVRLKSFRSIISKSSNNYSYSQSMSYSDIRIKAILRSSNGKSRYAEADSVPIPNTVLTEKPKCNDMESKVTTPRSKMVTSSDQNFRVSLGRHRRRMSDLI* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1874 643 MobiDBLite consensus disorder prediction 1 40 - -
Gso20g1874 643 Gene3D Kinesin motor domain 93 469 IPR036961 -
Gso20g1874 643 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 638 - -
Gso20g1874 643 Coils Coil 435 476 - -
Gso20g1874 643 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 22 638 - -
Gso20g1874 643 SMART kinesin_4 96 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1874 643 Coils Coil 57 91 - -
Gso20g1874 643 PRINTS Kinesin heavy chain signature 167 188 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1874 643 PRINTS Kinesin heavy chain signature 293 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1874 643 PRINTS Kinesin heavy chain signature 325 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1874 643 PRINTS Kinesin heavy chain signature 374 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1874 643 MobiDBLite consensus disorder prediction 19 40 - -
Gso20g1874 643 Pfam Kinesin motor domain 125 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso20g1874 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 465 IPR027417 -
Gso20g1874 643 ProSiteProfiles Kinesin motor domain profile. 98 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1874 Gso-Chr20 49442485 49446881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1874 56 424 Calmodulin-binding Proteins AT5G65930 38.462 9.23e-72 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1874 - - gmx:100778856 1212.98