Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1866 ATGGAATCCGATCTAAACGACGCCGTTTTTCCCGAAGAAGATCTCGACGACGACGACGAAACTCCAGAGGATGAAGAGGAGGAGGAGGACGACGACGTCTTAGATGACGATGAAACCGAACCCCCTCCCTCCGTCATCGCCGTCGCGCCGCCCGCTTCCGAAACGCTCGACACCGCGTTAATTCCGATCTCCTCCGTCGCGGATTCCTCGCCGAAACCGCTGCGCACGGAGCTAATCGAGGAGAAAAAAGCGCTGGACGATTCGCGGCGACTGTTCCAGCGTCTGTGGACAGACGAGGACGAGATCGGGCTCTTGCAGGGTTTTCTGGAGTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACCGCCCTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGGCTTCAACAAGAACCAGCTCGTCGAGAAGCTCCGAAGGCTGAAGAAGAAGTACCGCAACGTCCTCAACAAAATCAGCTCCGGCAAGGAAGTCTCTTTCAAGAGCCCTCACGACCGAGCCACCTTCGAAATCTCGCGCAGGATCTGGAGCAACACCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCATCACTAACCCTAATTTCGGCAATTCGGCGAAGATGCCTATTTCGCGGAAGCGGTCGCGGCCTCAGAAGCGCGAGTTGAACGACGGTTCAACGTTGAATAGAGATAATAATTGCAATAGTAACAGTAATAATAATAATAATAATGAGAATTGTAATAGTAGGCTTAACTTACAGGGTTTGATTGAAGAGACGGTGAGGAGTTGCGTGTCGCCGGTGTTGAAGGAGTTGGCGTGTGGTACTGGTGGCATGGGATTGGGAAGAGGGTTCGCATTGAATCCCTTGCAAATGCCAATGCCAATGAGTTTAATGAATTTGGGGATTGTTGGGGAAACGGCGATGGATGAGAAGTGGAGGAAGCAACAGATTCTGGAGCTGGAAGTGTATTCCAAACGTTTGGAATTGGTGCAGAATGAGATCAAGGTTGCTCTCGAGGAATTGCGTTCAGCTGGTGGAGGATGA 1062 0.5226 MESDLNDAVFPEEDLDDDDETPEDEEEEEDDDVLDDDETEPPPSVIAVAPPASETLDTALIPISSVADSSPKPLRTELIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLNKISSGKEVSFKSPHDRATFEISRRIWSNTAPITGPVEDDDEIITNPNFGNSAKMPISRKRSRPQKRELNDGSTLNRDNNCNSNSNNNNNNENCNSRLNLQGLIEETVRSCVSPVLKELACGTGGMGLGRGFALNPLQMPMPMSLMNLGIVGETAMDEKWRKQQILELEVYSKRLELVQNEIKVALEELRSAGGG* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1866 353 MobiDBLite consensus disorder prediction 1 52 - -
Gso20g1866 353 MobiDBLite consensus disorder prediction 232 251 - -
Gso20g1866 353 Coils Coil 140 160 - -
Gso20g1866 353 Coils Coil 319 346 - -
Gso20g1866 353 MobiDBLite consensus disorder prediction 189 251 - -
Gso20g1866 353 MobiDBLite consensus disorder prediction 1 39 - -
Gso20g1866 353 Pfam Protein of unknown function, DUF573 92 186 IPR007592 GO:0006355
Gso20g1866 353 PANTHER BNAANNG10740D PROTEIN 1 351 - -
Gso20g1866 353 PANTHER BNAANNG10740D PROTEIN-RELATED 1 351 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1866 Gso-Chr20 49350065 49351598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1866 43 353 GeBP Transcription Factor Family AT5G28040 48.485 2.82e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gso20g1866 DUF573 1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1866 - - gmx:100817182 613.224