Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1865 ATGCTTTCCCCGTTGGTTTCTTGGATCTTGTCTCCCTCCTCTTCCTCCTCCTCTTCCGAAGAAGAAGAAGAAGAGATCCTTGACATTATCACAGATAATGACATTAACCATGAAAATGACCAAAAGCTCAATGTAGAAGATGACGAGTGTGATGTGGACAACACCATTCCCGTTGCACTTGCTGTTCCCAATGCCTCCCCCGCCGTGACAGTGGCCTTCCCGGCCAATGACGAAAGAAACACCATCCCAGTCACCGCCACTGCCACCACTGTCGTAACATGCTCAAAAGGGCAGTGCAACGCCAAGTATTCCGGAATGGTGAGACAATACCAAAGGCTGTGGACGAAGGAGGATGAGATGGAACTGTTGAAGGGATACCTTGATTACGTCAAGCGGCATAGAAAGGAAACCACCACCCTCCAAAGCGTCGTAGCCTCGTTGTATGATCACGTAAGGCCCAAACTGAACGTGAGTTTCAACAAAAATCAGCTTGTTGAGAAACTGCGTAGGTTAAAGAGAAAACACAAGTTAGCTTTGGACAAAGACAAGGACAAGGAGGTTCCCTTTAGAAACCCCCAGGAGCAGGCCATTTTTGAAATTTCCCACAAGATTTGGGGCATTGACACGGATAATATAATAGACCAAGATGCCTTGGATGGTTATGAATCAGGACACACTCCTGAAAGTCATGATCATGTTGGCAACATCAAGGTGAAGATTGAACAACTTGACAACAATGATGAAATAGATAATAGAGTGCCAAAGCGGTTGCGGCTAGATGATGCAGATGATGCAGATGATGTGAACAAAACAAATGACCAAAACAATGGTGATAGCATACAAGGCTTCATTGAGGAGACCATGAGGTCATGTTTCCCACCATTGCTGAAGGAAGTGTTGCATGATGCACATGAAGAGCCACTTCCTGAGTTGGAGCCAATCCCAATGCCACTATGCCCTGGGGAAGTGGACCATGAACAATGGAGAAAACGGAGGATTTTGGAGTTGGAGGTGTATGTGAAGCGGTTGGAGTTGTTGCAGGATCAGATCAAGTCTAGATTGGAACAGTTGCGATCTAACTGA 1083 0.4608 MLSPLVSWILSPSSSSSSSEEEEEEILDIITDNDINHENDQKLNVEDDECDVDNTIPVALAVPNASPAVTVAFPANDERNTIPVTATATTVVTCSKGQCNAKYSGMVRQYQRLWTKEDEMELLKGYLDYVKRHRKETTTLQSVVASLYDHVRPKLNVSFNKNQLVEKLRRLKRKHKLALDKDKDKEVPFRNPQEQAIFEISHKIWGIDTDNIIDQDALDGYESGHTPESHDHVGNIKVKIEQLDNNDEIDNRVPKRLRLDDADDADDVNKTNDQNNGDSIQGFIEETMRSCFPPLLKEVLHDAHEEPLPELEPIPMPLCPGEVDHEQWRKRRILELEVYVKRLELLQDQIKSRLEQLRSN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1865 360 MobiDBLite consensus disorder prediction 1 24 - -
Gso20g1865 360 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 360 - -
Gso20g1865 360 PANTHER BNAANNG10740D PROTEIN-RELATED 1 360 IPR007592 GO:0006355
Gso20g1865 360 MobiDBLite consensus disorder prediction 256 271 - -
Gso20g1865 360 MobiDBLite consensus disorder prediction 1 17 - -
Gso20g1865 360 Coils Coil 161 181 - -
Gso20g1865 360 Coils Coil 340 360 - -
Gso20g1865 360 MobiDBLite consensus disorder prediction 256 278 - -
Gso20g1865 360 Pfam Protein of unknown function, DUF573 111 206 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1865 Gso-Chr20 49340902 49341984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1865 56 359 GeBP Transcription Factor Family AT5G28040 30.914 2.27e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gso20g1865 DUF573 4.8e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1865 - - gmx:102659511 624.394