Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1863 ATGGCGGACAAGGCAGTCACCATCCGAACCAGAAAGTTCATGACGAACAGGCTTCTCTCCAGAAAGCAATTCATCGTTGATGTCCTTCATCCAGGGAGGGCTAATGTTTCCAAGGCTGAACTGAAGGAGAAATTGGGCAGAATGTATGACGTGAAAGACACTAACACTGTATTTGTCTTCAAGTTTCGAACTCATTTTGGTGGTGGCAAGTCCACTGGGTTTGGTTTGATCTATGATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGGAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAGACAAAGGCTTCCGATGCTGCCAAGGCTGGAAAAAAGAAATGA 414 0.4348 MADKAVTIRTRKFMTNRLLSRKQFIVDVLHPGRANVSKAELKEKLGRMYDVKDTNTVFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1863 137 Pfam Ribosomal protein S24e 26 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Gso20g1863 137 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Gso20g1863 137 Gene3D - 1 132 - -
Gso20g1863 137 MobiDBLite consensus disorder prediction 102 137 - -
Gso20g1863 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 137 - -
Gso20g1863 137 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Gso20g1863 137 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Gso20g1863 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 137 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1863 Gso-Chr20 49330049 49331820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1863 1 132 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 84.848 1.23e-82 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1863 K02974 - gmx:100499673 243.817