Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso20g1831 | ATGGATAGGGTGTTCTCAGTGGACGATATCTCCGATCACTTCTGGCAGCCGCCTATCCCTGTCTCCGCCGCCCAAACTTCCTCCCAGATGAGCCGCAGCGCCTCCGAGTGGGCCTTCCAACGCTTCCTCCAGGAAGCTTCCGCCTCCGCACCCTCTCCTCCGTCTTCTTCCTCCGCCGCCGACGTCGTATTCGTCGAGATCGAAGATCAACCTAAGCCCGCCCCTCCCCCTCCGTCAAACGGCGCCGTTCTCCCCAATGCCCCTGGTCCCGTCCCCCTTGACTCCGACGAATACCAGGCCTTCCTCAAGAGCAAGCTCAACCTCGCATGCGCCGCCGTCGCCATGACTAGGGGATCTTTGGCTAAATCTCAAGACCCGTCCCCTTTTTCTGAAGGTGGATCACAGCCGACTAATCCTTCTCTAGTTGAATCTCAGACTACTTCTAAAGGATCTATTCCTTCTGAAAATGATCCATCTAAGTTACAAGATAAAGATACCAATGTACCAGTTGGGATTCCTTCCATACCTGCCATGCAAAAGAAACCTGCTGTTGCAATTAGGCCATCTACAAGTGGATCATCAAGAGAACAGTCAGATGATGAGGACATTGAGGGAGAGACATCTATGAATGACAACACAGACCCTGCTGATGTAAAACGAGTAAGGAGGATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGATGTTAGTCAGAAATACAGCGACTCTGCTGTTGACAACAGAGTTTTAAAAGCTGATGTTGAAACATTAAGAACAAAGGTGAAGATGGCCGAAGAGACCGTCAAAAGAATTACTGGATTGAACCCATTGCTTCATGCCATGTCTGATATATCATCACTGGGCCTGCCATCATTTGATGGAAGAAGCCCTTCAGACACTTCAGCTGATGCAGCTGTTCCTGTGCAAGATGATCCACATCATCACTTCTATCAACCCACATCTACTAATCCTATTCCCAGTCATGATCCGATAGTCAACAATGGATTGGGGGGCATTTCTTCAATTGAAAATGTGCAGCAGAATGCTGCAGTAGTGCTAGGTGGGAACAAGATGGGTCAAACAGCATCCCTGCAGCGGGTGGCTAGCTTGGAACATCTACAGGAGCGGATTCGTGGTGGACCTCCATCTAATGGGGAGCAGTGA | 1254 | 0.4936 | MDRVFSVDDISDHFWQPPIPVSAAQTSSQMSRSASEWAFQRFLQEASASAPSPPSSSSAADVVFVEIEDQPKPAPPPPSNGAVLPNAPGPVPLDSDEYQAFLKSKLNLACAAVAMTRGSLAKSQDPSPFSEGGSQPTNPSLVESQTTSKGSIPSENDPSKLQDKDTNVPVGIPSIPAMQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEETVKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQPTSTNPIPSHDPIVNNGLGGISSIENVQQNAAVVLGGNKMGQTASLQRVASLEHLQERIRGGPPSNGEQ* | 418 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso20g1831 | 417 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 217 | 269 | IPR004827 | GO:0003700|GO:0006355 | |
Gso20g1831 | 417 | PANTHER | BZIP TRANSCRIPTION FACTOR | 1 | 403 | - | - | |
Gso20g1831 | 417 | MobiDBLite | consensus disorder prediction | 70 | 85 | - | - | |
Gso20g1831 | 417 | Gene3D | - | 218 | 273 | - | - | |
Gso20g1831 | 417 | MobiDBLite | consensus disorder prediction | 117 | 242 | - | - | |
Gso20g1831 | 417 | MobiDBLite | consensus disorder prediction | 45 | 59 | - | - | |
Gso20g1831 | 417 | SMART | brlzneu | 215 | 279 | IPR004827 | GO:0003700|GO:0006355 | |
Gso20g1831 | 417 | Pfam | Basic leucine-zipper C terminal | 286 | 412 | IPR020983 | - | |
Gso20g1831 | 417 | SUPERFAMILY | Leucine zipper domain | 219 | 269 | IPR046347 | GO:0003700|GO:0006355 | |
Gso20g1831 | 417 | MobiDBLite | consensus disorder prediction | 213 | 228 | - | - | |
Gso20g1831 | 417 | MobiDBLite | consensus disorder prediction | 45 | 95 | - | - | |
Gso20g1831 | 417 | CDD | bZIP_plant_GBF1 | 220 | 271 | IPR045314 | GO:0003700|GO:0006355 | |
Gso20g1831 | 417 | Coils | Coil | 235 | 262 | - | - | |
Gso20g1831 | 417 | MobiDBLite | consensus disorder prediction | 324 | 358 | - | - | |
Gso20g1831 | 417 | MobiDBLite | consensus disorder prediction | 120 | 157 | - | - | |
Gso20g1831 | 417 | Coils | Coil | 277 | 297 | - | - | |
Gso20g1831 | 417 | Pfam | bZIP transcription factor | 218 | 270 | IPR004827 | GO:0003700|GO:0006355 | |
Gso20g1831 | 417 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 222 | 237 | IPR004827 | GO:0003700|GO:0006355 | |
Gso20g1831 | 417 | PANTHER | BASIC LEUCINE ZIPPER 63 | 1 | 403 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso20g1831 | Gso-Chr20 | 48974680 | 48978064 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso20g1831 | 1 | 308 | bZIP Transcription Factor Family | AT4G02640 | 42.857 | 6.81e-54 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gso20g1831 | bZIP_C | 1e-45 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso20g1831 | K25784 | - | gmx:778135 | 746.503 |