Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1795 ATGAATTGCTTCCCTTGTTGTGGCCCTAAAAAAAGCAATAGCAAGAGGGAGCATGGTTCTCCACCCCCAGAACTTGTTACAGCAAAAGCACAAGATATGAAGAAACAAAAAGCAGACGAACAAAACCAAGCTGGCACTGCCAATATTCAGGCACAGGCTTTCAGTTTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGTCAGGAATGCCTACTTGACGAAGGAGGTTTCGGCAGAATCTACAGAGGGATAATTCCTGCCACCGGCCAGCTTGTGGCCGTGAAGCAACTCGACCGAAATGGGATGCAAAGCAGTAATGAGTTTCTGGCTGAGGTTGCTGAGCTAAGTCTCTTGCACCATGAAAATCTGGTCAATCTCATTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTATACGACTTATTTGCTGCGCGTACTCTTGAAAATCGTCTTTTTGAGAATAAACCGGATGAAGGTCCATTAAATTGGTTTGACAGAATGAAAATAGTAGTGGGTGCTTCTAAAGGACTAGAGTACTTGCATGAGACTACCAACCCCCCGCTTATATTCCGGGACTTGAAAGCGTCCAGCATTTTGGTGGACAGTGATCTCCTTGCAAAACTATGTGATGTTGGCATGGCCAAGCTTTCTGGTGGAGACAAGATAAACAATGGACCTCCAAGACTTATGGGTACCTATGGTCACTGTGCTCCCGAGTATGTAAGAGCTGGTCAACTCACCATGAAATCAGATGTATACAGTTTCGGAGTTGTCTTGCTAGAGCTCATAACTGGACGAAGAGCCATTGACACCACAAGGCCAAACGAAGAGCAAAATCTTGTTGCATGGGCAACACCATTATTTAGGGATCCCAAGAGATACCCAGACATGGCAGATCCACTTCTTAATAAGAACTTTCCAGAAAAAGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGAAGCTCGTCCTTTGATCAGTGACGTTGTAAACGCTCTCAGCTTTCTATCCGCGCCTCCTCCTCCTGCTGCTCCTGTCCCTAAAAAGAGTGATGTTGCTGAAAGCGAAAGGGAAAGCGAGAGTGAGAGTGGAAGCGAAGCAATATCTAGCAAGGGAAGCCGCAGATCATCGGTGGATGAAAGCCAACATGATTCTGATAGCCATCTTCCACCAGCGGTTTCATCTAAACCAAGCCGCAAAAGCAGCACCAGATCAAGTAAGGGAGCACTCAGTTCAGAATCAGGAGATGAAGTTAGCGTTTCTTCCAGCAGCAAGAGCAGTAGGAAATCGCACGGTGATTTAAGCCACAAGAGCAGCAAAAAATCTTCAGTGAAAGATTTAAGCCAGAAGAGCAGCAAGAAATCTTCAGTGAAAGATTTAAGCCAGAAGAGCAGCAGAAAATCTTCCGTGGAAGATTTAAGCCAGCAGAAGAGCAGCAAAAAATCCTCTGTGGAAGATTTAAGCCAGAAGAGCAGCAGAAAGTCTTCTACTACCAAAGACTTAAGCCAGAAGAGCAGCAGAAAATCTTCCATCAGAGATCTGAGCCAAAAGAGCAGTAGAAAATCTTCTAGCAAAGTTTTGAGCCATAAGAGTAGCATGGCATCGGATGATGGAAGCATTTCCTCATCAAGCTGCCGTAGCAGCAGTGTGGGATCAGAGCGTAGCAGCATGAGGCTATCACAAGGGAGTTTTCACTCAGACCCATCATATAGCAGCAAAAGGAAAGAGGATGAGAGCATGCATTTATTAGACCGTGCAAGCAGCTTGCGATCTGATGAGGATAGTGGTCACCCTTTTGACCAAACTAGCAGCAGTGGATCAAGTGTTTATTCGAGATAA 1860 0.4527 MNCFPCCGPKKSNSKREHGSPPPELVTAKAQDMKKQKADEQNQAGTANIQAQAFSFRELATATKNFRQECLLDEGGFGRIYRGIIPATGQLVAVKQLDRNGMQSSNEFLAEVAELSLLHHENLVNLIGYCADGDQRLLVYDLFAARTLENRLFENKPDEGPLNWFDRMKIVVGASKGLEYLHETTNPPLIFRDLKASSILVDSDLLAKLCDVGMAKLSGGDKINNGPPRLMGTYGHCAPEYVRAGQLTMKSDVYSFGVVLLELITGRRAIDTTRPNEEQNLVAWATPLFRDPKRYPDMADPLLNKNFPEKDLNQVVAIASMCLQEEAEARPLISDVVNALSFLSAPPPPAAPVPKKSDVAESERESESESGSEAISSKGSRRSSVDESQHDSDSHLPPAVSSKPSRKSSTRSSKGALSSESGDEVSVSSSSKSSRKSHGDLSHKSSKKSSVKDLSQKSSKKSSVKDLSQKSSRKSSVEDLSQQKSSKKSSVEDLSQKSSRKSSTTKDLSQKSSRKSSIRDLSQKSSRKSSSKVLSHKSSMASDDGSISSSSCRSSSVGSERSSMRLSQGSFHSDPSYSSKRKEDESMHLLDRASSLRSDEDSGHPFDQTSSSGSSVYSR* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1795 619 Gene3D Phosphorylase Kinase; domain 1 26 142 - -
Gso20g1795 619 Gene3D Transferase(Phosphotransferase) domain 1 144 343 - -
Gso20g1795 619 PANTHER OS07G0668900 PROTEIN 1 582 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 512 526 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 436 473 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 496 511 - -
Gso20g1795 619 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1795 619 Coils Coil 477 497 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 605 619 - -
Gso20g1795 619 PANTHER RECEPTOR-LIKE KINASE LIP1 1 582 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 527 575 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 344 619 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 474 489 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 357 371 - -
Gso20g1795 619 Pfam Protein tyrosine and serine/threonine kinase 71 340 IPR001245 GO:0004672|GO:0006468
Gso20g1795 619 SUPERFAMILY Protein kinase-like (PK-like) 48 344 IPR011009 -
Gso20g1795 619 MobiDBLite consensus disorder prediction 576 604 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 394 435 - -
Gso20g1795 619 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1795 Gso-Chr20 48613094 48617365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1795 1 383 Glycoside Hydrolase AT3G07070 53.846 2.33e-150 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso20g1795 PK_Tyr_Ser-Thr 6.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1795 - - gmx:100804526 986.097