Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1793 ATGCATGGATTCAGTGCAGTGCTATCATCAGAGGAGTTGGAGACCCTAAAGAACACTCATGGTTTTGTCACAGCTTACCCTGATAGATCTGCCACCATAGACACCACACACACCTTTGAGTTTCTCTCTTTTAATCCCTCCAATGGCCTGTGGAATGCTTCAAATTTTGGAGAAGGTGTCATTGTGGGTATGATTGACACAGGTGTCAGGCCTGAAAGTGAGAGCTTCAAAGATGATGGCATGAGCAGAAACATCCCTTCCAAATGGAAAGGAACATGCGAGCCAGGACAAGACTTCAATACCTCCACGTGTAACTTCAAGTTAATTGGGGCTAGGTACTTCAACAAGGGTGTGAAAGCAGCGAATCCCAACATCACAATAAGAATGAACTCAGCGAGAGACACTCGGGGACATGGAAGCCACACATCATCCACTGTTGCTGGCAACTATGTTAATGGTGCTTCTTTCTTTGGCTACGCCAAAGGGGTAGCAAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTCCTTTGGGACGAAGGGGGTCACGGCTCTGATGTTCTTGCAGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTCATTTCAATCTCATTGGGCTTTGATAGTGTTCCACTTTATGAGGATCCGGTGGCAATAGCTGCTTTTGCAGCAATGGAAAAAGGGGTGTTGGTTTCATCTTCAGCAGGAAACGCAGGTACTATACTTGGCACCTTGCACAATGGAATCCCTTGGGTCTTAACCGTGGCAGCAGGCACCATAGACCGCACATTTGGAAGCTTGACACTGGGAGATGGTAAAATCATTGTGGGTTGTACCTTGTTTGCTGCTAACTCAATAGTGGAGAAGTTTCCACTTATTTACAACAAGACTGTATCAGCATGCAACTCGGTTAAACTATTAACCGGAGTAGCCACAAGAGGGATCATTATATGTGATGCCTTGGACTCAGTTTCTGTCTTAACCCAAATAGCTTCTGTTACCGCGGCCAGTGTGTATGGGGCTGTGTTTATCTCTGAGGATCCAGAACTAATTGAAAGAAGACGTTTGTTCACTCCAAGCATTGTGATCAGCCCAAATGATGCAAAATCGGTGATCAAGTACGCGAAAAGTGCTCAAAAACCATTTGCCAGCATCAACTTTCAACAAACATTTGTTGGAATAAAGCCAGCACCAGCTGTTGCAATTTACTCTTCAAGAGGTCCTTCACCAAGCTACCCGGGGATCTTGAAGCCTGATGTAATGGCACCTGGCTCCAATGTTCTGGCTGCTTTTGTTCCAAATAAACCTTCAGCCAGAATTGGCACAAATGTGTTTTTGTCAAGTGACTACAATTTCTTGTCTGGAACATCCATGGCATGTCCTCATGCATCTGGTGTTGCTGCTCTTTTGAAAGCAGCACACCCTGATTGGAGTGCAGCTGCTATAAGATCTGCATTGGTTACAACTGCTAATCCCCTTGATAATACTCAAAATCCAATCAGGGATAATGCAAACCTATTTCAATATGCTTCTCCTCTTGCTATGGGAGCTGGTGAGATTGAACCTAATAGAGCACTTGATCCTGGTCTCATATATGATGCCACCCCTCAGAACTATGTTAACCTCCTTTGTGCTTTGGGATACACAAACAACCAAATCTTATCCATCACAAGATCAAGGTCCTATGAATGTTCTGCCAACCCCTCATCTGATCTTAACTACCCTTCGTTTATAGTTTTGTATAGTAACAAAACAAGATCAACAGTCCGAGAGTTTAGGAGGATCGTGACCAATGTTGGAGATGGTGCTGCTACTTACAAAGTCAAGGTGACACAACCCAAGGGCTCTGTTGTCAAGGTGTCACCTGAGACATTGGCATTTGGCTATAAGAATGAGAAGCAGAGCTACTCTGTTACTGTAAAGTACACAAGAAACAAGAAAGAAAACATCTCATTTGGGGACATTGTTTGGGTCGAAGATGGTGGTGCACGCACGGTTAGAAGCCCCATTGTAGTGGCACCCAATGAACTTGCATGA 2046 0.4482 MHGFSAVLSSEELETLKNTHGFVTAYPDRSATIDTTHTFEFLSFNPSNGLWNASNFGEGVIVGMIDTGVRPESESFKDDGMSRNIPSKWKGTCEPGQDFNTSTCNFKLIGARYFNKGVKAANPNITIRMNSARDTRGHGSHTSSTVAGNYVNGASFFGYAKGVARGIAPRARLAMYKVLWDEGGHGSDVLAGMDQAIADGVDVISISLGFDSVPLYEDPVAIAAFAAMEKGVLVSSSAGNAGTILGTLHNGIPWVLTVAAGTIDRTFGSLTLGDGKIIVGCTLFAANSIVEKFPLIYNKTVSACNSVKLLTGVATRGIIICDALDSVSVLTQIASVTAASVYGAVFISEDPELIERRRLFTPSIVISPNDAKSVIKYAKSAQKPFASINFQQTFVGIKPAPAVAIYSSRGPSPSYPGILKPDVMAPGSNVLAAFVPNKPSARIGTNVFLSSDYNFLSGTSMACPHASGVAALLKAAHPDWSAAAIRSALVTTANPLDNTQNPIRDNANLFQYASPLAMGAGEIEPNRALDPGLIYDATPQNYVNLLCALGYTNNQILSITRSRSYECSANPSSDLNYPSFIVLYSNKTRSTVREFRRIVTNVGDGAATYKVKVTQPKGSVVKVSPETLAFGYKNEKQSYSVTVKYTRNKKENISFGDIVWVEDGGARTVRSPIVVAPNELA* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1793 681 Pfam Subtilase family 57 500 IPR000209 GO:0006508|GO:0008236
Gso20g1793 681 CDD PA_subtilisin_like 269 388 - -
Gso20g1793 681 Pfam Fibronectin type-III domain 574 675 IPR041469 -
Gso20g1793 681 Gene3D - 546 677 - -
Gso20g1793 681 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 676 IPR045051 -
Gso20g1793 681 CDD Peptidases_S8_3 32 494 IPR034197 -
Gso20g1793 681 SUPERFAMILY Subtilisin-like 35 533 IPR036852 GO:0004252|GO:0006508
Gso20g1793 681 Gene3D Peptidase S8/S53 domain 59 542 IPR036852 GO:0004252|GO:0006508
Gso20g1793 681 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Gso20g1793 681 PRINTS Subtilisin serine protease family (S8) signature 134 147 IPR015500 -
Gso20g1793 681 PRINTS Subtilisin serine protease family (S8) signature 457 473 IPR015500 -
Gso20g1793 681 ProSiteProfiles Serine proteases, subtilase domain profile. 36 529 - -
Gso20g1793 681 PANTHER OS01G0868800 PROTEIN 1 676 - -
Gso20g1793 681 ProSitePatterns Serine proteases, subtilase family, serine active site. 458 468 IPR023828 -
Gso20g1793 681 Gene3D - 264 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1793 Gso-Chr20 48591142 48593992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1793 1 676 Subtilisin-like Serine Gene Family AT5G67090 42.693 2.14e-170 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1793 - - gsj:114403047 1345.49