Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1769 ATGGGGAACGGGAGCAGAAGCTACTCGGCGAACCGGAGCGACTACAAGCTTCTAGAAGAAGTCGGTTACGGCGCCAGCGCCACCGTCTACCGTGCAATCTACCTCCCCTACAACGAGGAGGTCGCCGTCAAGTGCCTGGATCTGGATCGCTGCAATATAAATCTGGACGACATACGTAGGGAGGCGCAGACGATGAGCCTGATAGAGCACCCCAACGTGGTGAGGGCCTACTGCTCCTTCGTGGTGGAGCGGAGCCTGTGGGTGGTGATGGCATTCATGGCGCAGGGCTCCTGCCTGCACCTCATGAAGGCTGCTTATCCCGAGGGATTCGAAGAGGCCGCCATCGGATCTATCCTCAAGGAGACTCTCAAGGCGTTGGAGTATCTCCACCGACACGGCCACATTCACCGTGACGTTAAGGCCGGGAATATTCTCCTCGACGATAACGGCCAGGTCAAGCTCGCCGACTTCGGCGTCTCCGCTTGCATGTTCGACACCGGCGACCGCCAGCGCTCCAGAAACACCTTCGTCGGAACTCCCTGCTGGATAGCGCCGGAGGTGCTGCAACCTGGAACCGGTTACAATTTCAAGGCGGATATTTGGTCGTTTGGGATTACTGCGTTGGAGTTGGCTCATGGTCACGCGCCTTTCTCCAAGTATCCTCCCATGAAGGTTCTTTTGATGACCATTCAGAATGCTCCTCCGGGGCTTGATTATGATCGTGATAGAAAGTTCTCCAAGTCTTTCAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCATCCGTGGAGAAGTTGCTCAAACACTCCTTCTTCAAACAGGCTAAGCCACCGGAGCTTTCTGTAAAGAAATTATTTGCTGATTTACCGCCTCTGTGGAACCGTGTAAAATCCCTCCAGCATAAAGATGCAGCTCAGCTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCTATATCTCAAAGTGAATATCATCGAGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCACAAGCGGCATTGATGCAGGACGGTGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTCTTACAAGGGTACAGCTGATTCCCAGTTTATTGTGGATGAAAAGAATTCAAATAACTTGCAACAATATGAGTTCACATCACAAGTAGGTAGTAACGACATACCACAGTGTGAGAAAAGAAATGGATCAGTTGCTGAAGCAACACCATCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCCCTGATGCCAGGCTTAGTGCTTGGTCATTCTTCATCTGAAAGAGGGCGTACATTTGAAAGGTTTGAGAATGAAAACCAGTTAGCGGGTGAGAAAAGTAATCGTGATATACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATCAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGATTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGGGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTACAAACAAATGCCAATTGGTCAGTCCTCCAATGATTCTGCCAATATCAATATTCCTGCATCACTTTTAGTGCCTCATCTTCACAATCTTTTTCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAAACTGCCGAGGCAATTGATACTTCTCAGAACGGGAAGTTACCACCATTACCTCGCAATTCAGAGAACAACGGAAGTGCCGATACAGCAGTTTCAGAGAGGGAACAGCTGCTGCTGGGCAAAATTTCAGAACTCCAATCCCGGATGATTAATTTGACCGACGAACTGACTTATGAGAAGTTAAGATATGTGCAGTTGCAACAACAGCTAACTGGTCTCTACAGCCAGGAACAAAATGGGGAAAGAGAGGAATTTGCATGA 2115 0.4681 MGNGSRSYSANRSDYKLLEEVGYGASATVYRAIYLPYNEEVAVKCLDLDRCNINLDDIRREAQTMSLIEHPNVVRAYCSFVVERSLWVVMAFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDDNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWIAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKSLQHKDAAQLALKKMPSAEQEAISQSEYHRGVSAWNFDIDDLKAQAALMQDGDDIAEMREEDENKFFSSYKGTADSQFIVDEKNSNNLQQYEFTSQVGSNDIPQCEKRNGSVAEATPSTLENDVGTSKVKTQSVKLGKTQSGPLMPGLVLGHSSSERGRTFERFENENQLAGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPMRKSASVGDWMVDYKQMPIGQSSNDSANINIPASLLVPHLHNLFQQTSIQQDLIMNLLNSLQTAEAIDTSQNGKLPPLPRNSENNGSADTAVSEREQLLLGKISELQSRMINLTDELTYEKLRYVQLQQQLTGLYSQEQNGEREEFA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1769 704 CDD STKc_OSR1_SPAK 13 276 - -
Gso20g1769 704 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1769 704 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gso20g1769 704 SUPERFAMILY Protein kinase-like (PK-like) 13 329 IPR011009 -
Gso20g1769 704 Gene3D Transferase(Phosphotransferase) domain 1 96 328 - -
Gso20g1769 704 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 697 - -
Gso20g1769 704 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1769 704 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 697 - -
Gso20g1769 704 MobiDBLite consensus disorder prediction 626 648 - -
Gso20g1769 704 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Gso20g1769 704 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g1769 704 MobiDBLite consensus disorder prediction 419 440 - -
Gso20g1769 704 MobiDBLite consensus disorder prediction 419 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1769 Gso-Chr20 48334319 48344141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1769 8 696 MAP Kinase Kinase Kinase Kinase AT4G10730 65.434 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gso20g1769 Pkinase 6.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1769 - - gmx:100783699 1396.72