Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1768 ATGGCCATTTTTTCAAGTCACCACAGAATGTTGGTGTCTCTCTTGCTTACGTTGGTCCAAATCCAAGCCAAGGTGTTTTGCTATCAATACAAAGTGGGAGATCTAGATGCTTGGGGCATACCCACATCAGCAAATCCACAAGTCTACACAAAATGGTCCAAATATCATAATCTCACAATTGGAGACTCCCTTTTATTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTTACAGAGGAATCCTACAAGAGGTGCAACATTAAAGACCCGATATTGTACATGAACAATGGCAACTCTTTGTTTAACATTACATCAAAGGGCCAATTCTTCTTCACTAGTGGTGAGCCTGGCCATTGCCAAAAAAATCAAAAGCTTCATATATCTGTTGGTGAAGGAATAATAGAAACTATGGATACAGCACCTGGTCCAAGTTCGTCATTGCCTGCATCTGCACCCTCCTATCCCACAGTATTTGGCAATATTCCAGTAGCTCCTTCAACCTCAACCTCACCTCAACTCACATCAACTTTTCAACTTCTCATCATTGGATTTATGATATGTGCGCACTTCGCTTCCTTAATGTGA 588 0.4099 MAIFSSHHRMLVSLLLTLVQIQAKVFCYQYKVGDLDAWGIPTSANPQVYTKWSKYHNLTIGDSLLFLYPPSQDSVIQVTEESYKRCNIKDPILYMNNGNSLFNITSKGQFFFTSGEPGHCQKNQKLHISVGEGIIETMDTAPGPSSSLPASAPSYPTVFGNIPVAPSTSTSPQLTSTFQLLIIGFMICAHFASLM* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1768 195 CDD OsENODL1_like 28 130 IPR041846 -
Gso20g1768 195 PANTHER MAVICYANIN 5 191 - -
Gso20g1768 195 PANTHER BLUE COPPER PROTEIN 5 191 IPR039391 GO:0009055
Gso20g1768 195 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Gso20g1768 195 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Gso20g1768 195 Gene3D - 28 140 IPR008972 -
Gso20g1768 195 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1768 Gso-Chr20 48330458 48331769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1768 1 164 Phytocyanin Superfamily AT1G64640 55.090 1.72e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1768 - - gmx:100527517 380.563