Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1746 ATGGCTTCCAGGCGTTTGAGGGCATTCAAGCGGTGGATGAAGTCGAAGGGGCTCGAATGGAGCGATGCACTGGAGTTTGTGGACACCCCAGAAGAAGGAGTTGAAGTGAGAGCATTGTGCCAGTTGAAGGAAGGTGATGTTGTGGCCAAGATGCCAAAGGAAGCTTGCCTCACCACAAAGACCAGTGGGGCACGTAAGATCATTGAAGAGGCTGGTTTGGATGGTCATTTGGGGCTTGCATTTGCTATCATGTATGAGAGAAGCTTGGATGGGGACTCTCCTTTTGCTGGCTACCTTCAACTCTTGCCTCACCAAGAGTGTGTGCCAATTGTTTGGACCCTCGATGAAGTAAACGAGCTTTTGTGTGGTACTGAGCTTCATCAGACAGTGCAAGAAGACAAGGCTCTGATTTATGATGACTGGAAAGAGAATATTCTACCCCTATTGGATTTAGCACCTTTAAAACTAAATCCAAAGTTCTTTGGCGTAGAACAATACTTTGCAGCAAAAAGTCTTATATCTTCACGATCTTTTGAGATTGATGATTACCATGGTTTTGGCATGGTTCCCTTGGCAGATCTATTCAATCATAAAACAGGTGCCGAGGATGTGCATTTCACTGCTATGTCCTCTAATGATGAGTCTGATACTGATGTTGATGGCTGTAACGATGATGAGGGCATTGTCAAGGAAGAAACATTGGCTCAAAATTCCTCTATAGATATGACCGTGTTAAATAATGGGAACTGCAATGTTAGTGACTCGGATAGTTCTTCAGTTAGTGATGGTGATACTTCTATGCTGGAGATGATTATGATAAAAGATGTCAGCAGTGGAACTGAGGTATTTAATACTTATGGGCTATTGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAATTCCTATGATATTGTAAACATAGATATGGAACTGGTACTTCAATGGTGTACTTCTGTGTTTTCTGACCGCCACAGTAGAGCAAGAGTTTCCCTTTGGAGAAAGTTAGGCTATTCTGCATGTGGCAGCCAAAACTCTGAATATTTTGAGATCTCATTTGATGGAGAACCACAGATTGAACTCCTCGTTTTATTGCACATCATGTTATTACCAGATAATGCCTACCATAAGTTAGACCTATCGGTTGCTGGAAATTGTGATGAATCAAGTGGAACCACCTTTCTGAATGGTAATATCTTTCCTAGTAAAGCATTTAATATGAGCAAGAAATCCTTGCTGCCTAAAAAAGTTTGTGATGTCCTGTCGTCACTTGCTGATATGAGGGAGAGTCTCTATGGCTTGAAATCAATTGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTTAGTTAGAGAGAGAAAGCTGTATCATTCTTTGATGCTGCGCATCAATGAAAGGAAGATCCTCCAGAGGCTCAGAAATTATGCTTCACAGCCATTTAAAAATAAAATCACTAACCATAGTTCTCCGAGGAAGAAGTTGAAAAGAACAACAAAGAAAACGAGTTGA 1521 0.4129 MASRRLRAFKRWMKSKGLEWSDALEFVDTPEEGVEVRALCQLKEGDVVAKMPKEACLTTKTSGARKIIEEAGLDGHLGLAFAIMYERSLDGDSPFAGYLQLLPHQECVPIVWTLDEVNELLCGTELHQTVQEDKALIYDDWKENILPLLDLAPLKLNPKFFGVEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTAMSSNDESDTDVDGCNDDEGIVKEETLAQNSSIDMTVLNNGNCNVSDSDSSSVSDGDTSMLEMIMIKDVSSGTEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDMELVLQWCTSVFSDRHSRARVSLWRKLGYSACGSQNSEYFEISFDGEPQIELLVLLHIMLLPDNAYHKLDLSVAGNCDESSGTTFLNGNIFPSKAFNMSKKSLLPKKVCDVLSSLADMRESLYGLKSIEDDIEALGRCSLVRERKLYHSLMLRINERKILQRLRNYASQPFKNKITNHSSPRKKLKRTTKKTS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1746 506 MobiDBLite consensus disorder prediction 484 506 - -
Gso20g1746 506 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 5 487 - -
Gso20g1746 506 ProSiteProfiles SET domain profile. 22 287 IPR001214 GO:0005515
Gso20g1746 506 SUPERFAMILY SET domain 3 207 IPR046341 -
Gso20g1746 506 Gene3D set domain protein methyltransferase, domain 1 2 300 - -
Gso20g1746 506 MobiDBLite consensus disorder prediction 490 506 - -
Gso20g1746 506 Gene3D - 303 480 IPR036464 -
Gso20g1746 506 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 487 - -
Gso20g1746 506 PIRSF RMS1_SET 1 483 IPR011383 GO:0016279|GO:0018026
Gso20g1746 506 SUPERFAMILY SET domain 255 306 IPR046341 -
Gso20g1746 506 Pfam SET domain 33 287 IPR001214 GO:0005515
Gso20g1746 506 CDD SET_LSMT 23 301 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1746 2 505 NAC Transcription Factor Family AT3G56570 53.271 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso20g1746 SET 2.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1746 K05302 - gmx:100794971 968.763