Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1740 ATGCGCTTTTTGGCACACAATGGAATATTTGATATCCATGAGAGACAAGAAGATCATGAACCAACATATGCTCTCACCTCTGCTTCAAAGCTTCTTGTCAGTGGCAGTGATCACTGTTTATCTCCAATGGTTCTGTTGAATACTGATCAACTTCTGACGAGTACATACCATCAGTTGGGGGAGTGGATTCGAGGGGAGGACCTTTCAGTATTTGAGACAGCCTACGGAACAAGCGGTTGGAGATTTTTTTTTGAGAAAAACCCTGAATATTTTAGGCTTTTCAATGAGGCTATGGCAAGTGATTCCCGAATAGTAGACTTGGCACTCAAAAATTGCACTTCAGTTTTTGAGGGGCTAGATCCCATCGTGGATGTTGGTGGTGGAACTGGAACCACGGCCAGAATTATCTGTGACGCATTTCCTAAGTTGAAAAATGATTGTGTGATGCAGATCTACTAA 459 0.4248 MRFLAHNGIFDIHERQEDHEPTYALTSASKLLVSGSDHCLSPMVLLNTDQLLTSTYHQLGEWIRGEDLSVFETAYGTSGWRFFFEKNPEYFRLFNEAMASDSRIVDLALKNCTSVFEGLDPIVDVGGGTGTTARIICDAFPKLKNDCVMQIY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1740 152 Pfam O-methyltransferase domain 56 144 IPR001077 GO:0008171
Gso20g1740 152 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 144 IPR029063 -
Gso20g1740 152 Gene3D Vaccinia Virus protein VP39 34 150 IPR029063 -
Gso20g1740 152 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 1 147 - -
Gso20g1740 152 PANTHER O-METHYLTRANSFERASE 1 147 IPR016461 GO:0008168
Gso20g1740 152 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 152 IPR016461 GO:0008168
Gso20g1740 152 Gene3D - 1 32 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1740 Gso-Chr20 48064920 48066159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1740 1 144 Monolignol Biosynthesis Gene Families AT5G54160 28.378 2.37e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1740 K22588 - gmx:100792875 316.235