Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1731 ATGGCTTCCCTGGCGGCTTCCACCGCAGCTATGTCAGAAATGCTTGGAAACCCCGTGAGCCTGAGAGGCGCCACCAGGTCTGCTCCATCACCGTCTACACCTGTTACTTTCAAGACCGTTGCGCTTTTCTCCAAGAAGAAGGCAGCACCACCTCCTCCAAAGAAAAAGCCTGCTGCTGTATCCCCCGCCAATGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGAGGGTCTCTTGGACCGATCAGAGATCCCCGAGTACTTGACCGGAGAAGTGCCTGGAGATTATGGTTATGACCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTCGCCAAATACCAGGCGTTTGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTTTGCTTCTTGATGGGGGTACGTTGAACTACTTCGGGAAACCCATCCCCATCAATCTTATTGTTGCTGTTGTTGCTGAGATAGTTCTTGTGGGTGGTGCTGAGTACTACAGAATAATTAATGGCCTGGATTTGGAAGACAAGCTTCATCCAGGTGGTCCATTTGACCCATTGGGCCTAGCAAAGGATCCAGACCAAGCTGCACTTCTAAAGGTGAAGGAAATTAAGAATGGTAGGCTTGCAATGTTTGCAATGCTTGGTTTCTACTTCCAAGCTTATGTCACTGGAGAAGGTCCAGTTGAGAACTTAGCAAAACATCTCAGTGACCCTTTTGGTAATAACCTGCTCACTGTGATTGCTGGCTCCGTTGAGAGGGCTCCAACTCTGTAA 867 0.4948 MASLAASTAAMSEMLGNPVSLRGATRSAPSPSTPVTFKTVALFSKKKAAPPPPKKKPAAVSPANEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSVERAPTL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1731 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 288 IPR001344 GO:0009765|GO:0016020
Gso20g1731 288 Pfam Chlorophyll A-B binding protein 90 251 IPR022796 -
Gso20g1731 288 Gene3D Chlorophyll a/b binding protein domain 77 288 - -
Gso20g1731 288 SUPERFAMILY Chlorophyll a-b binding protein 69 279 - -
Gso20g1731 288 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1731 Gso-Chr20 48004928 48007783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1731 1 288 Chloroplast and Mitochondria Gene Families AT4G10340 80.623 6.12e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1731 K08916 - gmx:100817348 547.74